FC930327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 60/169 (35.50%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +TLP L Y +AL P IS E + H+ KHH YV N ++ A K V + GAI N NH+ +W ++ P + GGE PH + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGE-PHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYY 165
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 60/169 (35.50%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +TLP L Y +AL P IS E + H+ KHH YV N ++ A K V + GAI N NH+ +W ++ P + GGE PH + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGE-PHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYY 165
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 60/169 (35.50%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +TLP L Y +AL P IS E + H+ KHH YV N ++ A K V + GAI N NH+ +W ++ P + GGE PH + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGE-PHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYY 165
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 60/169 (35.50%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +TLP L Y +AL P IS E + H+ KHH YV N ++ A K V + GAI N NH+ +W ++ P + GGE PH + I FGS ++ S GSGW WL L+ K ++++T +P+ K T +P+L D+WEHAYY Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFA-EKSLLDIVKESSGAIFNNAAQIWNHTFYWDSMGP--DCGGE-PHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPI--KDNTGIPILTCDIWEHAYY 165
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_ENTHI (Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 62/170 (36.47%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN---KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY Y+ALEP IS E ++ HH KHH YV N K EQ + L ++ Q AI N NH+ +WK + G G P L + FG LE +K + + GSGW WL ++ + K +++T +P+ + PLL DVWEHAYY Sbjct: 5 LPQLPYAYNALEPHISKETLEFHHDKHHATYVNKLNGLVKGTEQEHKTLEELIKQKPTQ---AIYNNAAQAWNHAFYWKCMC----GCGVKPSEQLIAKLTAAFGGLEEFKKKFTEKAVGHFGSGWCWL-VEHDGKLEIIDTHDAVNPMTN---GMKPLLTCDVWEHAYY 163
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PSEPU (Superoxide dismutase [Fe] OS=Pseudomonas putida GN=sodB PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20 Identity = 63/167 (37.72%), Postives = 79/167 (47.31%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY + AL+P IS E ++ HH KHH YV N N V + K V G I N NH+ +W LAP GG+P +L AI+ FGS + ++ + GSGW WL + + T PL T T PLL DVWEHAYY Sbjct: 5 LPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGT-EFEGKTLEEIVKTSSGGIFNNAAQVWNHTFYWNCLAP--NAGGQPT-GALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCPL-TSGDT--PLLTCDVWEHAYY 164
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 58/172 (33.72%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-----LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LPDLPYD + +P + E HH KHH +YV N N ++ + L K D +++ + AI N NH+ FW ++ P GGG+ P + I FGS E + E GSGW W+ + + K +++T+ P+V + P+L DVWEHAYY Sbjct: 16 LPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDR-EELQKKDLEEIIEWSSQNAEVAILNNASQIWNHTFFWYSIKP--HGGGK-PSGKVFEQISKDFGSFEQFCAQFKQEAVGQFGSGWTWV-VYHDNKLQIIKTSNAGTPIVN---FMKPILACDVWEHAYY 179
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PSEHT (Superoxide dismutase [Fe] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=sodB PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 57/167 (34.13%), Postives = 81/167 (48.50%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP LPY ALEP IS E ++ HH KHH YV N + + NK V G + N NH+ +W +L+P GG P ++ AI+ +GS +A + ++ + GS W WL + +V T+ PL T P+L +D+WEHAYY Sbjct: 4 LPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGT-KFENKSLEEIVCSSDGGVFNNAAQIWNHTFYWNSLSP---NGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVKLADGSLDIVNTSNAATPLTDDGVT--PILTVDLWEHAYY 164
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20 Identity = 68/173 (39.31%), Postives = 82/173 (47.40%), Query Frame = 2 Query: 182 TLPDLPYDYSALEP-AISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ---ALNKVDTSTVVQLQGAIKFNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 T P LP+ ALEP + E H+ KHH AYVTN NK VE +L V + FN V NH+ FW L GGG P L ID FGSL+ ++ S A GSGW WL +D V +T ++PLV PLL +DVWEHAYY Sbjct: 4 TQPPLPFPKDALEPYGMKAETFDYHYGKHHAAYVTNLNKLVEGTPMESLSLEDVIKQSFGDSSKVGVFNNAAQVWNHTFFWNCLKA---GGGGAPTGELAAKIDAAFGSLDKFKEEFSNAAATQFGSGWAWL-VDDGGTLKVTKTPNAENPLVHGQK---PLLTLDVWEHAYY 169
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_ANASP (Superoxide dismutase [Fe] OS=Anabaena sp. (strain PCC 7120) GN=sodB PE=3 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19 Identity = 63/169 (37.28%), Postives = 85/169 (50.30%), Query Frame = 2 Query: 194 LPYDYSALEP-AISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIK---FNGGGHV-NHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LPYD++ALE + GE + H+ KHH+AYV N NK + A ++ + + A K FN V NH+ FW +L P GG P I+ FGS + L ++ S A GSGW WL +D V +T ++PL A LL +DVWEHAYY Sbjct: 8 LPYDFNALEQYGMKGETFEYHYGKHHKAYVDNLNKLTDGTELADKSLEEVIQIAFKDASKAGIFNNAAQVWNHTFFWNSLKPA---GGGAPTGEFAAKINQDFGSFDKLKEEFSNAAATQFGSGWAWL-IDDGGTLKVTKTPNAENPL---AHGQKALLTLDVWEHAYY 169 The following BLAST results are available for this feature:
BLAST of FC930327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930327 ID=FC930327; Name=FC930327; organism=Citrus clementina; type=EST; length=686bpback to top |