FC930327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRAY (Superoxide dismutase [Mn/Fe] (Fragment) OS=Streptococcus alactolyticus GN=sodA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.058e-14 Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 227 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD------TSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGI 661 I E M LHH KHH Y+ N N A+E+ + ++ T ++ A+ NGGGH+NH++FW+ L P + EP L AI+ FGS E + GSGW WL ++ E K L V +T NQD +++ P+LG+ Sbjct: 2 IDKETMILHHDKHHATYLANANAALEKHPEIGEDLEFLLSDVTRIPEDIRQALINNGGGHLNHALFWELLTPEKQ---EPTAEVLA-AIEDAFGSFEDFKTAFTQAATTRFGSGWAWLVVNQEGK-LEVMSTGNQDNPISQGKQ--PILGL 145
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_AQUAE (Superoxide dismutase [Fe] OS=Aquifex aeolicus GN=sodB PE=3 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 56/160 (35.00%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 227 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 IS E ++ H + H++ YV YN+ E+L N D S Q L+ FN G V H +++ LAP GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY Sbjct: 20 ISNEQIEPHFEAHYKGYVAKYNEIQEKLADQ-NFADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLAP---GGKGEPSEALKKKIEEDLGGLDACTNELKA--AAIAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYY 171
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_AQUPY (Superoxide dismutase [Fe] OS=Aquifex pyrophilus GN=sodB PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 55/160 (34.38%), Postives = 76/160 (47.50%), Query Frame = 2 Query: 227 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQ-------LQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 IS E ++ H + H++ YV YN+ E+L N D S Q L+ FN G V H +++ L P GG P +L I+ G L+A ++ A AA+ GW LGLD RLVV + V L+PL+ ID +EHAYY Sbjct: 20 ISNEQIEPHFEAHYKGYVAKYNEIQEKLADQ-NFADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLTP---GGKGEPSEALKKKIEEDIGGLDACTNELKA--AAMAFRGWAILGLDIFSGRLVVNGLDAHN--VYNLTGLIPLIVIDTYEHAYY 171 The following BLAST results are available for this feature:
BLAST of FC930327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930327 ID=FC930327; Name=FC930327; organism=Citrus clementina; type=EST; length=686bpback to top |