FC930327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_CALJA (Superoxide dismutase [Mn], mitochondrial OS=Callithrix jacchus GN=SOD2 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45 Identity = 92/168 (54.76%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NHSIFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYY Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYY 166
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_HORSE (Superoxide dismutase [Mn], mitochondrial OS=Equus caballus GN=SOD2 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.945e-45 Identity = 93/171 (54.39%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 173 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 Q +LPDL YDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + + LQ A+KFNGGGH+NH+IFW NL+P GGGEP L AI FGS + +K++A A +QGSGW WLG + + RL + NQDPL L+PLLGIDVWEHAYY Sbjct: 24 QKHSLPDLQYDYGALEPYINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHTIFWTNLSP--NGGGEPKGKLLD-AIKRDFGSFDKFKEKLTAVSAGVQGSGWGWLGFNKDQGRLQIVACPNQDPL-QGTTGLIPLLGIDVWEHAYY 190
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_DROME (Superoxide dismutase [Mn], mitochondrial OS=Drosophila melanogaster GN=Sod2 PE=2 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44 Identity = 91/176 (51.70%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 158 GLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 G+RG T LP LPYDY+ALEP I EIM+LHHQKHHQ YV N N A EQL +A +K DT+ ++QL A++FNGGGH+NH+IFW+NL+P P L AI++ + SLE ++++ A+QGSGW WLG + + +L + NQDPL + L+PL GIDVWEHAYY Sbjct: 14 GVRGKHT--LPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSP----NKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGKLQLAALPNQDPL-EASTGLIPLFGIDVWEHAYY 182
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM2_CAEEL (Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis elegans GN=sod-3 PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.462e-44 Identity = 93/168 (55.36%), Postives = 114/168 (67.86%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 TLPDLP+DY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K + + LQ A+KFNGGGH+NHSIFW NLA + GGEP + I FGSL+ L +++S A+QGSGW WLG + K L + T ANQDPL +VPL GIDVWEHAYY Sbjct: 27 TLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKEAIALQPALKFNGGGHINHSIFWTNLA---KDGGEPSKELMD-TIKRDFGSLDNLQKRLSDITIAVQGSGWGWLGYCKKDKILKIATCANQDPL----EGMVPLFGIDVWEHAYY 186
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_RABIT (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Oryctolagus cuniculus GN=SOD2 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.493e-44 Identity = 90/168 (53.57%), Postives = 111/168 (66.07%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +LPDLPYDY ALEP I+ +IM+LHH KHH AYV N N E+ +AL + D + V LQ A+KF GGGH+NH+IFW NL+P GGGEP L AI FGS + ++++A +QGSGW WLG + E L + ANQDPL L+PLLGIDVWEHAYY Sbjct: 8 SLPDLPYDYGALEPHINAQIMELHHSKHHAAYVNNLNATEEKYREALARGDVTAHVALQPALKFKGGGHINHTIFWTNLSP--NGGGEPKGELLE-AIKRDFGSFDKFKERLTAVSVGVQGSGWGWLGFNKEQGHLQIAACANQDPL-QGTTGLIPLLGIDVWEHAYY 171
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.554e-44 Identity = 98/176 (55.68%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 164 RGLQT-VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS-SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 RG+ T TLP LPY Y+ALEPA+S IM+LHH KHHQ YV N N A E+L A +D V LQ AIKFNGGGH+NHS+FWK LAP EGGG+P S SL AI + +GSLE ++M+A A++QGSGW WL +D + L + TTANQD +V P++GID WEHAYY Sbjct: 20 RGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKL--ADPNLDLEGEVALQAAIKFNGGGHINHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDFQKEMNAALASIQGSGWAWLIVDKD-GSLRITTTANQDTIVKSK----PIIGIDAWEHAYY 188
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_GANMI (Superoxide dismutase [Mn], mitochondrial OS=Ganoderma microsporum PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.237e-43 Identity = 87/171 (50.88%), Postives = 117/171 (68.42%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHE----GGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LPDLPY Y+ALEP IS +IM+LHH+KHHQ YV + N A + +A + + LQ A+KFNGGGH+NHS+FWKNLAP GG L AI+ ++GS++ I++ +A AA+QGSGW WLGL+ KRL + TTANQDPL++ VP++G+D+WEHA+Y Sbjct: 5 LPDLPYAYNALEPFISQQIMELHHKKHHQTYVNSLNAAEQAYAKASTPKER---IALQSALKFNGGGHINHSLFWKNLAPAKSEGKGNGGALADGPLKSAIEQNWGSVDNFIKEFNATTAAIQGSGWGWLGLNPATKRLEITTTANQDPLLSH----VPIIGVDIWEHAFY 168
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_ONCVO (Superoxide dismutase [Mn], mitochondrial OS=Onchocerca volvulus GN=sod-2 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.600e-43 Identity = 93/183 (50.82%), Postives = 117/183 (63.93%), Query Frame = 2 Query: 137 LGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +GK+ L + L+ V LPDLPYDY ALEP +S EIMQ+HH KHH AYV N+A E++ +AL K DT V + FN GGH+NH++FW+ L V G P+S L AI FGSLE +I K++A+ A+QGSGW WL D E KRL + NQD L+ L+PL IDVWEHAYY Sbjct: 13 VGKNYCLNTQRLKHV-LPDLPYDYGALEPILSAEIMQVHHGKHHAAYVNALNQAEEKVKEALAKGDTQAAVAGTKLMNFNTGGHINHTLFWEGLTAVKNSG--EPNSELMTAIKKDFGSLETMIDKLNAKTIAIQGSGWGWLAYDKEMKRLQLACCPNQD-LLEPTTGLIPLFCIDVWEHAYY 191
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_CANAL (Superoxide dismutase [Mn], mitochondrial OS=Candida albicans GN=SOD2 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.747e-41 Identity = 84/171 (49.12%), Postives = 116/171 (67.84%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPP--HSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 +LP+L Y++SA EP ISG+I ++H+ KHHQ YV N N ++EQ +A +K + +V L+ AI FNGGG++NH ++WKNLAPV +GGG+PP S LG I FGSL+ LI+ + + A +QGSGW ++ + + V TTANQD + P LVPL+ ID WEHAYY Sbjct: 37 SLPELDYEFSATEPYISGQINEIHYTKHHQTYVNNLNASIEQAVEAKSKGEVKKLVALEKAINFNGGGYLNHCLWWKNLAPVSQGGGQPPSEDSKLGKQIVKQFGSLDKLIEITNGKLAGIQGSGWAFIVKNKANGDTIDVITTANQDTVTD--PNLVPLIAIDAWEHAYY 205
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_GLOMM (Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans morsitans GN=Sod2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40 Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 2 Query: 137 LGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 L +++ +RG T LP LPYDY AL P IS +I+++HH KHHQ YV N N EQ+ +A +K D + VV+L FN GGH+NHSI+W+NL+P P + L AI+ F S E + +SA +QGSGW WLG + + K+L + +NQ+PL LVPL IDVWEHAYY Sbjct: 8 LSRTIKAAVRGKHT--LPKLPYDYGALAPIISKDILEVHHGKHHQTYVNNLNAVEEQMTEAHSKKDVNKVVELSKNYAFNWGGHLNHSIYWQNLSPTK----SEPSADLKKAIEEQFSSFEQFKKDLSALSIGVQGSGWGWLGYNKKXKKLQILAVSNQEPL-QAVTGLVPLFAIDVWEHAYY 183 The following BLAST results are available for this feature:
BLAST of FC930327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930327 ID=FC930327; Name=FC930327; organism=Citrus clementina; type=EST; length=686bpback to top |