FC930327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_PENCH (Superoxide dismutase [Mn], mitochondrial OS=Penicillium chrysogenum GN=SOD PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.849e-39 Identity = 88/176 (50.00%), Postives = 111/176 (63.07%), Query Frame = 2 Query: 173 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNL----APVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFK-RLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 QT TLP LPY Y ALEP IS +IM+LHHQKHHQ Y+ N N A+ A D T++ LQ ++FNGGGH+NHS+FWKNL P ++ G P +L AI + +GS EA ++ AE LQGSGW WL K RL + TT +QDP+ AP VP+ G+D+WEHAYY Sbjct: 4 QTHTLPPLPYAYDALEPVISKQIMELHHQKHHQTYINNLNAALSAQASATASNDVPTLISLQQKLRFNGGGHINHSLFWKNLTPPGTPANDIAGAP---ALREAIVSRWGSHEAFVKAFGAELLGLQGSGWGWLVSKGGAKGRLEIVTTKDQDPV--NAPD-VPVFGVDMWEHAYY 173
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_ASPFU (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus fumigatus GN=sodB PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 3.154e-39 Identity = 82/172 (47.67%), Postives = 106/172 (61.63%), Query Frame = 2 Query: 173 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSS-LGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 Q TLP LPY Y AL+P IS +IM+LHH+KHHQ YV N A+E +A D +V +Q AIKFNGGGH+NHS+FWKNLAP GGG+ + L AI+ +GS + + +QGSGW WL D +L + TT +QDP+ A P+ G+D+WEHAYY Sbjct: 3 QQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEANDVPKLVSVQQAIKFNGGGHINHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPVTGAA----PVFGVDMWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.379e-39 Identity = 86/179 (48.04%), Postives = 110/179 (61.45%), Query Frame = 2 Query: 161 LRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVH--EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDT--EFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + GL T +LP LPY Y+ALEP IS +IM+LHH KHHQ YVTN N A++ A+ D + Q AIKFNGGGH+NHS+FWKNLAP E SL I+ +GS + + SA +QGSGW WL ++ E RL + TT +QDP+V VP+ G+D+WEHAYY Sbjct: 28 MAGLATYSLPQLPYAYNALEPYISAQIMELHHSKHHQTYVTNLNNALKVHVAAIASSDIPAQIAQQPAIKFNGGGHINHSLFWKNLAPAETPETNYSKAAPSLAAEIEKTWGSFDEFKKAFSAALLGIQGSGWGWLVKESTAEKGRLRIITTKDQDPVVGGE---VPVFGVDMWEHAYY 203
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_TETPY (Superoxide dismutase [Fe] OS=Tetrahymena pyriformis PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.379e-39 Identity = 84/166 (50.60%), Postives = 102/166 (61.45%), Query Frame = 2 Query: 194 LPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPP--HSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 L Y+YS LEP +S ++ HH KHHQAYV N N EQ+ A + D + LQ A++FN GGHVNH I+W NLAPV GGG P HS L AI +GS E I + AA+QGSGW WLG DT K L + NQD + + ++VPLL IDVWEHAYY Sbjct: 1 LNYEYSDLEPVLSAHLLSFHHGKHHQAYVNNLNATYEQIAAATKENDAHKIATLQSALRFNLGGHVNHWIYWDNLAPVKSGGGVLPDEHSPLTKAIKEKWGSYENFITLFNTRTAAIQGSGWGWLGYDTVSKSLRLFELGNQD--MPEWSSIVPLLTIDVWEHAYY 164
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_YEAST (Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces cerevisiae GN=SOD2 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.026e-39 Identity = 92/199 (46.23%), Postives = 121/199 (60.80%), Query Frame = 2 Query: 128 AIGLGKSVGLGLRGLQT----VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKV--------DTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLD-TEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 A L K GL L VTLPDL +D+ ALEP ISG+I +LH+ KHHQ YV +N AV+Q FQ L+ + + ++ +Q IKF+GGG NH +FW+NLAP +GGGEPP +L AID FGSL+ LI+ + + A +QGSGW ++ + + +L V T NQD T LVPL+ ID WEHAYY Sbjct: 7 AANLTKKGGLSLLSTTARRTKVTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQ-FQELSDLLAKEPSPANARKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQD---TVTGPLVPLVAIDAWEHAYY 201
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_BRAFL (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Branchiostoma floridae PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39 Identity = 85/147 (57.82%), Postives = 98/147 (66.67%), Query Frame = 2 Query: 227 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 667 IS EIMQ+HHQKHH YV N N A EQL +A++K D + ++ LQ AIKFNGGGH+NHSIFW NL P GGGEP L AI FGS EA +KM+A A+QGSGW WLGLD K+L + NQDPL L PLLGIDV Sbjct: 2 ISAEIMQVHHQKHHATYVNNLNAAEEQLAEAIHKQDVTKMIALQSAIKFNGGGHINHSIFWNNLCP--SGGGEPT-GPLAEAITRDFGSFEAFKEKMTAATVAVQGSGWGWLGLDPTSKKLRIVACPNQDPL-EGTTGLKPLLGIDV 144
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_EPTST (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Eptatretus stoutii PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.554e-38 Identity = 83/147 (56.46%), Postives = 99/147 (67.35%), Query Frame = 2 Query: 227 ISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDV 667 IS EIMQLHH KHH AYV N N E+L +AL K D +T V LQ A +FNGGGH+NHSIFW+NL+P GGG+P L AI+ FGS++ L +K+ A +QGSGW WLG + E KRL + T ANQDPL L PLLGIDV Sbjct: 2 ISAEIMQLHHSKHHAAYVNNVNVVEEKLAEALGKGDVNTQVSLQPAFRFNGGGHINHSIFWRNLSP--SGGGQPCGDLLK-AIENDFGSVDKLREKLVAAAVGVQGSGWAWLGFNKESKRLQIATCANQDPL-QGTTGLFPLLGIDV 144
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_DEBHA (Probable superoxide dismutase [Mn], mitochondrial OS=Debaryomyces hansenii GN=DEHA2E01232g PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.554e-38 Identity = 82/176 (46.59%), Postives = 113/176 (64.20%), Query Frame = 2 Query: 167 GLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTE-FKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 G + LP L + Y +LEP ISG+I ++HH+KHHQ YV YN A+EQL +A ++ D + +Q IKF+GGGH NH +FWK+LAP + GG+ P S +LG I +GS++ LI +A+ A++QGSGW ++ + + L V TT NQD T LVPL+ ID WEHAYY Sbjct: 8 GKNKIELPQLDWAYDSLEPYISGKINEIHHKKHHQTYVNGYNSAIEQLIEAESQGDVKKAIVIQQNIKFHGGGHTNHVLFWKSLAPNSQNGGKHPGSDTNLGKKIIEQYGSIDNLISITNAKLASIQGSGWAFIVKNKQNGGNLDVVTTYNQD---TVTDPLVPLIAIDAWEHAYY 180
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.325e-37 Identity = 80/172 (46.51%), Postives = 105/172 (61.05%), Query Frame = 2 Query: 176 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAP--VHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 T +LP LPY Y ALEP I +IM++HHQKHHQ Y+TN N A+ AL + ++ LQ IKFNGGGH+NHS+FWKNLAP E + L AI+ +GS+E + A LQGSGW WL + +L + +T +QDP+ K VP+ G+D+WEHAYY Sbjct: 4 TFSLPPLPYAYDALEPVICKQIMEIHHQKHHQTYITNLNAALSAQSTALAANNIPQLINLQQKIKFNGGGHINHSLFWKNLAPHASPETNIDQAAPVLKAAIEAQYGSVEKFKEAFGATLLGLQGSGWGWLVANGPGGKLEIVSTKDQDPVTDK----VPVFGVDMWEHAYY 171
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODB_ASPNG (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus niger GN=sodB PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.325e-37 Identity = 79/170 (46.47%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHS--SLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 TLPDLPYDY ALEP IS +IM+LHH+KHHQ YV N N A+ AL+ D + ++ +Q +KFNGGGH+NHS+FWKNLA S SL AI+ +GS++ A +QGSGW WL + L + TT +QDP+ +P+ G+D+WEHAYY Sbjct: 6 TLPDLPYDYDALEPIISKQIMELHHKKHHQTYVNNLNAALASQASALDSNDITQLISIQQKLKFNGGGHINHSLFWKNLARYDSPATNLERSAPSLKDAIEKQWGSVKNFTDAFEAVLLGIQGSGWGWLVSSGKTGFLEIVTTKDQDPVTGP----IPVFGVDMWEHAYY 171 The following BLAST results are available for this feature:
BLAST of FC930327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930327 ID=FC930327; Name=FC930327; organism=Citrus clementina; type=EST; length=686bpback to top |