FC930327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.826e-33 Identity = 73/177 (41.24%), Postives = 106/177 (59.89%), Query Frame = 2 Query: 176 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV-------QLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 T LP LPY Y ALEP E M++H+ KHH YVT N+AV + +K V +++GA++ +GGGH NH++FW +L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD +++ T P+LG+DVWEHAYY Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNN--GKLEIVSTANQDSPLSEGKT--PVLGLDVWEHAYY 171
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.283e-32 Identity = 77/178 (43.26%), Postives = 104/178 (58.43%), Query Frame = 2 Query: 185 LPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN-----------KAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 LP+LPY Y ALEP E M +HH KHH Y+TN N K+VE+L LN+V + ++ A++ NGGGH NH+ FW L+P GGG+P L AI+ FGS +A ++ + GA GSGW WL ++ L V +T NQD +T+ T P++G+DVWEHAYY Sbjct: 6 LPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELADKSVEELVANLNEVPEA----IRTAVRNNGGGHANHTFFWTILSP--NGGGQPV-GELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVNN--GELEVTSTPNQDSPLTEGKT--PVIGLDVWEHAYY 172
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_MYCTU (Superoxide dismutase [Fe] OS=Mycobacterium tuberculosis GN=sodB PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32 Identity = 76/169 (44.97%), Postives = 100/169 (59.17%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYY 685 TLPDL +DY ALEP ISG+I +LHH KHH YV N AV +L +A K D S ++ + + FN GHVNH+I+WKNL+P GG+ P L AI FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA+Y Sbjct: 5 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHAFY 167
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODF_MYCBO (Superoxide dismutase [Fe] OS=Mycobacterium bovis GN=sodB PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32 Identity = 76/169 (44.97%), Postives = 100/169 (59.17%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYY 685 TLPDL +DY ALEP ISG+I +LHH KHH YV N AV +L +A K D S ++ + + FN GHVNH+I+WKNL+P GG+ P L AI FGS + + A +QGSGW LG DT +L++ + T P +VPLL +D+WEHA+Y Sbjct: 5 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWKNLSP---NGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQ---TNFPLGIVPLLLLDMWEHAFY 167
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.859e-32 Identity = 78/178 (43.82%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 TLP LPY Y ALEP I + M++HH KHHQ YV N A VE+L A+ ++ S L+GA+ +GGGH NHS+FW ++P +GGGE PH L AI + G +A + + GSGW WL + T K LVVE++ NQD + T P+ G+DVWEHAYY Sbjct: 4 TLPALPYAYDALEPHIDAQTMEIHHTKHHQTYVNGLNAAIEGTEWAEWPVEKLVGAVKQLPES----LRGAVTNHGGGHANHSLFWTVMSP--QGGGE-PHGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWLSV-TPQKTLVVESSGNQDSPLMFGNT--PIFGLDVWEHAYY 171
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 8.318e-32 Identity = 82/183 (44.81%), Postives = 104/183 (56.83%), Query Frame = 2 Query: 182 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKA----------VEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVH-EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYY 685 TLP LPY Y ALEP I M++HH KHHQ YV N NKA VEQL Q L++V +GA++ N GGH NHS+FW+ + + G P L AI++ FGS +A QK GSGW WL + + +L V +TANQD PL+ +A V P+LG+DVWEHAYY Sbjct: 4 TLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVPADK----KGALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVV--KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYY 180
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 76/175 (43.43%), Postives = 99/175 (56.57%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + LP+LPY Y ALEP I E M LHH KHHQ YV N N A+E + +AL S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+DVWEHAYY Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 76/175 (43.43%), Postives = 99/175 (56.57%), Query Frame = 2 Query: 179 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE------QLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 + LP+LPY Y ALEP I E M LHH KHHQ YV N N A+E + +AL S ++ A+ NGGGH+NH++FW+ + P P + L AID FGS E +A GSGW WL ++ E K L V +TANQD +++ P+LG+DVWEHAYY Sbjct: 3 IILPELPYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTA----PSAELAAAIDATFGSFEEFQAAFTAAATTRFGSGWAWLVVNKEGK-LEVTSTANQDTPISEGKK--PILGLDVWEHAYY 170
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 74/177 (41.81%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 176 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQL-------QGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 T LP LPY Y ALEP E M++H+ KHH YVT N+AV + +K V L +GA++ +GGGH NH++FW L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYY Sbjct: 2 TYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVND--GKLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYY 171
BLAST of FC930327 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.419e-31 Identity = 75/177 (42.37%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 176 TVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAV-------EQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYY 685 T LP LPY Y ALEP E M+LH+ KHH YVT N+AV E+ + L S ++GA++ +GGGH NH++FW L+P GG P L AI++ FG+ + +K +A AA GSGW WL ++ +L + +TANQD ++ T P+LG+DVWEHAYY Sbjct: 2 TYELPKLPYTYDALEPNFDKETMELHYTKHHNTYVTKLNEAVSGHPELAEKPVEELVANLDSVPEDIRGAVRNHGGGHANHTLFWSILSP---NGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVNN--GKLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYY 171 The following BLAST results are available for this feature:
BLAST of FC930327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930327 ID=FC930327; Name=FC930327; organism=Citrus clementina; type=EST; length=686bpback to top |