FC930340

Overview
NameFC930340
Unique NameFC930340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_NITOC (Chaperone protein htpG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 60/146 (41.10%), Postives = 87/146 (59.59%), Query Frame = 3
Query:    6 DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK 437
            ++  SL DY++RMKEGQ+ IYYIT +S  A ++SP LE  +KKG EVL + D +DE+ V  L EFEGK L S TK  L L   E E EK+ ++ ++E F+ L + +K+ LG               P CLV  ++  +  +ER++K
Sbjct:  417 EQTVSLADYLSRMKEGQDKIYYITADSFPAAKSSPHLEVFRKKGIEVLLLSDRVDEWLVASLPEFEGKSLQSVTKGELDLGHLEDEQEKQQQKEVEEDFQNLVERVKNNLGDKVKEVRVTHRLTDSPVCLVVEQHDMSGYLERLLK 562          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 61/143 (42.66%), Postives = 84/143 (58.74%), Query Frame = 3
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKE--KFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            SL DYV RMK+GQ  IYY+T +S  A ++SP LE  +KK  EV+ + D +DE+ V  L EFEGK L S  K  L L + EDE + KE  KE  +++ L + IK+VLG               P CLVT  +  + N+ER++K+
Sbjct:  426 SLSDYVGRMKDGQEKIYYVTADSLTAAKSSPHLEIFRKKDIEVILLFDRVDEWLVANLPEFEGKHLQSVAKGSLDLGKLEDEAEKKEQEKEAGEYKELTEKIKEVLGEQVKDVRITLRLTESPACLVTETHDMSGNLERLLKS 568          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_DECAR (Chaperone protein htpG OS=Dechloromonas aromatica (strain RCB) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.799e-24
Identity = 60/147 (40.82%), Postives = 86/147 (58.50%), Query Frame = 3
Query:    6 DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLK--EKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            ++  SL DY+ RMKEGQ  IY++T ++  A +NSP LE  +KKG EVL + D +DE+ VG L EF+GK L S  K GL L + EDE + +E  K  + ++ L + +K  LG               P CLV+ E+  + N+ R+MKA
Sbjct:  420 EQNVSLADYIGRMKEGQEKIYFVTADTFNAAKNSPHLEIFRKKGIEVLLLSDRVDEWVVGHLTEFDGKHLQSVAKGGLDLGKLEDEAEKQEAEKAADDYKELLEKVKTSLGDKVKDVRVTYRLTDSPSCLVSDEHDPSGNLARLMKA 566          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.799e-24
Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 3
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE--KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFERQQHGWLHVQQEDH 494
            +  SL+DYV RMKEGQ  IYYIT +S  A +NSP LE  +KKG EVL M + +DE+ +  L EF+GK+LVS T+  L L + EDE  K+ +E  ++   GL + +K  LG               P C+VT  +G +  M ++M+A      +  ++     DH
Sbjct:  427 QTVSLEDYVGRMKEGQQKIYYITADSYAAAKNSPHLEIFRKKGVEVLLMWERVDEWLMSHLTEFDGKQLVSVTRGELDLGDLEDEASKQAQEEAEKANAGLVERVKQSLGEAVKEVRVTHRLTDSPSCIVTDAHGMSTQMIKLMRAAGQPVPEQKYILELNPDH 590          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.080e-24
Identity = 56/155 (36.13%), Postives = 82/155 (52.90%), Query Frame = 3
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEK----FEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFERQQ 461
            E T L DYVTRMK+GQ DIYY TGE++  +ENSP +E  + KG+EVL + D +DE  V ++ E+EGK L S  K  + LD +E+E+   E  +E+    +  L   +   L                P C+V   +  T  +E++ +A   E  Q
Sbjct:  416 EPTDLADYVTRMKDGQTDIYYATGENRSTIENSPHMEAFRAKGFEVLLLTDPVDEVWVERVGEYEGKTLRSVAKGQVDLD-TEEERSAAEAERERQRTEYADLLTWLSSTLADQVREVRLSARLTTSPACVVGDAHDVTPTLEKMYRAMGHEVPQ 569          

HSP 2 Score: 32.7278 bits (73), Expect = 8.080e-24
Identity = 15/54 (27.78%), Postives = 27/54 (50.00%), Query Frame = 1
Query:  484 KKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTF 645
            K+ +E+NP +P++  LRK  +    ++S+K+             G  L DP+ F
Sbjct:  571 KRILELNPTHPLVSGLRKAREQGVTEESLKETAELLYGMALLAEGGELADPSHF 624          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24
Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 3
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDE--KKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFERQQHGWLHVQQEDH 494
            +  SL+DYV RMKEGQ  IYYIT +S  A +NSP LE  +KKG EVL M + +DE+ +  L EF+GK+LVS T+  L L + EDE  K+ +E  ++   GL + +K  LG               P C+VT  +G +  M ++M+A      +  ++     DH
Sbjct:  423 QTVSLEDYVGRMKEGQQKIYYITADSFAAAKNSPHLEIFRKKGVEVLLMWERVDEWLMSHLTEFDGKQLVSVTRGELDLGDLEDEASKQAQEEAEKANAGLVERVKTSLGEAVKEVRVTHRLTDSPSCIVTDNHGMSTQMIKLMRAAGQPVPEQKYILELNPDH 586          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_STRCO (Chaperone protein htpG OS=Streptomyces coelicolor GN=htpG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.051e-23
Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 3
Query:    6 DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKK--MKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFE 452
            +E T+LKDYV RMKEGQ+DIYY+TGES++A+ENSP +E  + KG EVL + DA+DE  V  + E+EGK L S  K  + L  +E +K    KE   E++ GL   + + LG               P C+V+     T  +E + +A   E
Sbjct:  418 EEPTALKDYVERMKEGQDDIYYMTGESRQAIENSPHMEAFRAKGVEVLLLTDAVDEVWVDAVGEYEGKTLRSVAKGEIDLSGTEADKSDAEKEKQGEEYAGLLGWMTEHLGEEVKEVRLSSRLTVSPACVVSDAGELTPALENMYRAMGQE 568          

HSP 2 Score: 24.6386 bits (52), Expect = 1.051e-23
Identity = 10/29 (34.48%), Postives = 21/29 (72.41%), Query Frame = 1
Query:  481 SKKTMEINPENPIMEELRKRADADKNDKS 567
            +K+ +E+NPE+ +++ L  RA  D+ D++
Sbjct:  572 AKRILELNPEHQLVKSL-NRAWTDRQDRA 599          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_XANAC (Chaperone protein htpG OS=Xanthomonas axonopodis pv. citri GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.051e-23
Identity = 56/149 (37.58%), Postives = 78/149 (52.35%), Query Frame = 3
Query:    3 GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            G +   L DYV R+ +GQ+ +YY+TGES   +++SP LE  +KKG EVL + D IDE+ +  L EF+GK  V   +  L   KLD  ED+K  +E  K K EGL   IK  LG               P  L  G+      M ++++A
Sbjct:  416 GAQSVGLADYVGRLADGQDKLYYLTGESYAQIKDSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKSFVDVARGDLDLGKLDSEEDKKAQEEVAKSK-EGLASRIKAALGDDVAELRVSHRLTDSPAILAIGQGDLGLQMRQLLEA 563          

HSP 2 Score: 33.8834 bits (76), Expect = 1.051e-23
Identity = 21/78 (26.92%), Postives = 35/78 (44.87%), Query Frame = 1
Query:  436 RLRPLRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            ++R L + S      SK   E NP +P++E+L    D D+      D            +G SL DP  +  R++++L
Sbjct:  556 QMRQLLEASGQAVPESKPVFEFNPTHPLIEKLDAEQDMDR----FGDLSRVLFDQAALAAGDSLKDPAAYVRRLNKLL 629          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: ENPLL_HUMAN (Putative endoplasmin-like protein OS=Homo sapiens GN=HSP90B2P PE=5 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.060e-23
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 3
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFE 452
            ++TSL   V RMKE Q+ I  + G                  GYEV+Y+ + + EY +  L EF+GK+  +  KEG+K D+SE  K+  E ++++FE L   +KD  +                 C LV  +YGW+ NMERIMKAQA++
Sbjct:  177 DITSLHQDVERMKEKQDKICLMAG------------------GYEVIYLTEPVVEYCIQALPEFDGKRFQNVAKEGVKFDDSEKTKESHEAVEKEFEPLPNWVKDKAIKDKIEKAMVSQCLTESLCALVASQYGWSGNMERIMKAQAYQ 307          

HSP 2 Score: 37.7354 bits (86), Expect = 1.060e-23
Identity = 15/35 (42.86%), Postives = 25/35 (71.43%), Query Frame = 1
Query:  472 YMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 576
            + S KKT EINP +P++ ++ +R   D++DK+V D
Sbjct:  317 HASRKKTFEINPRHPLIRDMLRRIKEDEDDKTVLD 351          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_BORPE (Chaperone protein htpG OS=Bordetella pertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.368e-23
Identity = 57/150 (38.00%), Postives = 84/150 (56.00%), Query Frame = 3
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFE 452
            +  S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS  K GL L E   E+EKK +  + E F+ L + ++  L                P C+V G+   + ++ R++KA   E
Sbjct:  422 QTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALAEQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLKAAGQE 571          

HSP 2 Score: 26.5646 bits (57), Expect = 1.368e-23
Identity = 15/62 (24.19%), Postives = 28/62 (45.16%), Query Frame = 1
Query:  484 KKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            K  +EINP++ ++  +R  +DA+  D +                G  + DP  F  R++ +L
Sbjct:  576 KPVLEINPDHALVARIRDASDAEFGDWAA-----LLLDQALLAEGAQIADPAAFVKRLNGLL 632          
The following BLAST results are available for this feature:
BLAST of FC930340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
HTPG_NITOC5.206e-2441.10Chaperone protein htpG OS=Nitrosococcus oceani (st... [more]
HTPG_NITMU5.206e-2442.66Chaperone protein htpG OS=Nitrosospira multiformis... [more]
HTPG_DECAR6.799e-2440.82Chaperone protein htpG OS=Dechloromonas aromatica ... [more]
HTPG_AERHH6.799e-2438.41Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_SALTO8.080e-2436.13Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_AERS48.880e-2438.41Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_STRCO1.051e-2340.40Chaperone protein htpG OS=Streptomyces coelicolor ... [more]
HTPG_XANAC1.051e-2337.58Chaperone protein htpG OS=Xanthomonas axonopodis p... [more]
ENPLL_HUMAN1.060e-2335.57Putative endoplasmin-like protein OS=Homo sapiens ... [more]
HTPG_BORPE1.368e-2338.00Chaperone protein htpG OS=Bordetella pertussis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34006E01EF PostHarvC1 Citrus clementina cDNA clone C34006E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930340 ID=FC930340; Name=FC930340; organism=Citrus clementina; type=EST; length=714bp
GTGGTGATGAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAA
GGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGA
GAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCT
ACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTT
GAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGA
GAGTGAAGATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGG
GTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTT
GTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGA
GTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTTG
AGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGAT
CAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGG
ACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACT
GCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAA
CAGAATCCACAGGATGTTGAAAACTCGGGCTGAGCATCGAGAAGATGCTG
GTGATGCTGATGCT
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