FC930340

Overview
NameFC930340
Unique NameFC930340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_ALKMQ (Chaperone protein htpG OS=Alkaliphilus metalliredigens (strain QYMF) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 45/144 (31.25%), Postives = 78/144 (54.17%), Query Frame = 3 
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            ++ +L +YV RMKE Q  IYY +G+S + ++  P  E L ++GYE+LY  D +DE+A+  L +++ K+  S +   L ++E +DEK+ +E   +  + +   +K+ L                P CL T +   T  ME+I+ A
Sbjct:  415 KMVTLDEYVGRMKEDQKYIYYASGDSIEKIDKMPQTELLAEQGYEILYFADDVDEFAIRVLVDYKEKEFKSVSSGDLGIEE-KDEKEEQEEQTQGSKEVFAFMKEALSQKVKDVRPSKRLKNHPVCLAT-DGDVTIEMEKILSA 556
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_RICRS (Chaperone protein htpG OS=Rickettsia rickettsii (strain Sheila Smith) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.753e-14
Identity = 38/150 (25.33%), Postives = 74/150 (49.33%), Query Frame = 3 
Query:    6 DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 443
            +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT+  + ++++  + + K T  +K +   K++    K+ LG               P CL   +      MER +  Q
Sbjct:  400 NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 549

HSP 2 Score: 27.335 bits (59), Expect = 8.753e-14
Identity = 15/65 (23.08%), Postives = 32/65 (49.23%), Query Frame = 1 
Query:  478 SSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLK 672
            +S K +E+NP+N I+E++    D   N+K+ ++             G  + D   F  R++ +++
Sbjct:  555 ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNLIFDQACILEGEPVADTGAFSKRLNDIVQ 617
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_RICRO (Chaperone protein htpG OS=Rickettsia rickettsii (strain Iowa) GN=htpG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.753e-14
Identity = 38/150 (25.33%), Postives = 74/150 (49.33%), Query Frame = 3 
Query:    6 DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 443
            +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT+  + ++++  + + K T  +K +   K++    K+ LG               P CL   +      MER +  Q
Sbjct:  400 NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 549

HSP 2 Score: 27.335 bits (59), Expect = 8.753e-14
Identity = 15/65 (23.08%), Postives = 32/65 (49.23%), Query Frame = 1 
Query:  478 SSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLK 672
            +S K +E+NP+N I+E++    D   N+K+ ++             G  + D   F  R++ +++
Sbjct:  555 ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNLIFDQACILEGEPVADTGAFSKRLNDIVQ 617
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_WOLSU (Chaperone protein htpG OS=Wolinella succinogenes GN=htpG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.754e-14
Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = 3 
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGE 401
            SL+ Y  RMKEGQ  IYY+ GE+   ++NSP LEK KK+  EVL+  + ID   +  + ++    L +      + D+  +E+ + E  KE+F+ L +  +  L                P C+V  E
Sbjct:  407 SLQSYKERMKEGQKAIYYLMGENADLLQNSPLLEKFKKREIEVLFFDEEIDSIVMPMVNQYGDLPLKAI--NSAEADKDFEEESVSEEEKERFKPLLERFEKALSGEIKSVRLSKRLVDSPACVVADE 532

HSP 2 Score: 27.7202 bits (60), Expect = 8.754e-14
Identity = 17/72 (23.61%), Postives = 31/72 (43.06%), Query Frame = 1 
Query:  457 NSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLK 672
            N++  +   K  +E+NPE+P++ +L    D ++      D               SL D   F  R++ ML+
Sbjct:  548 NALGDFPEPKPILELNPEHPMVGKLLALEDEER----ASDYAHLLLDQAKLLESGSLKDAVGFAKRLNAMLE 615
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 48/160 (30.00%), Postives = 79/160 (49.38%), Query Frame = 3 
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE-SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFERQQHGWLHVQQEDH 494
            SL+DYV RM+ GQN I+YIT ++  + +N+P LEKLK+K  EVL + D IDE+ +  + EF+  K  S +K    L+   +DE   ++  ++K   +   IK  L                P  + T E   T  M +++ +   E  +  ++     +H
Sbjct:  423 SLEDYVKRMQSGQNKIFYITSDNYLSAKNNPHLEKLKEKKIEVLLLFDRIDEWMMNYMTEFKKIKFQSISKYSSYLENIFKDENNDQKNTEQKLSTIILRIKSYLKDRVKDVRFTSKLTNSPSTVTTDENDITTQMSKLLISTGQESPEIKYIFELNANH 582
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.137e-13
Identity = 38/150 (25.33%), Postives = 74/150 (49.33%), Query Frame = 3 
Query:    6 DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQ 443
            +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT+  + ++++  + + K T  +K +   K++    K+ LG               P CL   +      MER +  Q
Sbjct:  402 NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKEIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQ 551

HSP 2 Score: 27.335 bits (59), Expect = 1.137e-13
Identity = 15/65 (23.08%), Postives = 32/65 (49.23%), Query Frame = 1 
Query:  478 SSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLK 672
            +S K +E+NP+N I+E++    D   N+K+ ++             G  + D   F  R++ +++
Sbjct:  557 ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNLIFDQACILEGEPVADTGAFSKRLNDIVQ 619
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_BORBU (Chaperone protein htpG OS=Borrelia burgdorferi GN=htpG PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.137e-13
Identity = 44/149 (29.53%), Postives = 72/149 (48.32%), Query Frame = 3 
Query:    6 DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFE 452
            D   S K+Y  RM E Q  IYYITG  +  ++ +P +   K+KG+E+L M D +DE  +  + E+EG KL +  K     +E +DE   K  ++E+F+     +K++L                P  ++      T  M++IM +   E
Sbjct:  405 DGFVSFKEYKERMNESQKSIYYITGGKENILKENPIVAAYKEKGFEILIMDDELDEAILNLIPEYEGLKLKAINKNETS-NELKDENFKK--IEEEFKDTLTKVKEILKDHIKEVNLSATLIKEPSAIIIDSNDPTYQMQKIMLSMGQE 550

HSP 2 Score: 23.8682 bits (50), Expect = 1.137e-13
Identity = 17/63 (26.98%), Postives = 28/63 (44.44%), Query Frame = 1 
Query:  484 KKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLK 672
            K  +E+NP N I++ L K  + +K +K               TSG    +P  F N I+  ++
Sbjct:  555 KPILELNPNNKIVQNL-KNLEPEKLEK----ISILLFEEAMLTSGMPSKNPGKFINIINEFIE 612
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_EXIS2 (Chaperone protein htpG OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 3 
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            +L +L +YV  M E Q  IYY +GES   ++  P  E +K KG+++LY  + IDE+A+  L  ++GK+  S T   L ++++E + +  ET  E F    K +++VL                P C  T +   +  ME+I+KA
Sbjct:  414 KLVTLAEYVAAMPEEQKYIYYASGESTDRLDKLPQSELVKDKGFDILYFTEEIDEFAIQMLLNYDGKEFKSVTSSDLGIEQTE-QAETTETQAEMF----KAMQEVLAGHVKEVKASTRLKSHPVCFAT-DGAVSIEMEKILKA 551
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_CLOTE (Chaperone protein htpG OS=Clostridium tetani GN=htpG PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 3 
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD-ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIM 434
            +L +L +YV+RMK+ Q  IYY  GE+   +E  P  E ++ KGYE+LY  D +DE+A+  L  ++ K+  S   + L  + E ++E+K  +  KE FE     +KDVL                P CL       +  ME+++
Sbjct:  415 KLVTLDEYVSRMKDDQKYIYYAPGENIDKIEKLPQTEIVRDKGYEILYFADEVDEFAIKMLMNYKEKEFKSVYSKDLGFEAEEKEEQKENDENKEVFE----FMKDVLNGKVKEVRASKRLKSHPVCLANAS-DISIEMEKVL 552
[Close]
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_AZOC5 (Chaperone protein htpG OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=htpG PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.476e-13
Identity = 44/143 (30.77%), Postives = 66/143 (46.15%), Query Frame = 3 
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD----ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIM 434
            +LKDYV  +KE Q  IYYITG+  + VE++P LE  + +G EVL + D +D + V    ++EGK   S T+    L        DE +  E   +        +K+ LG                 CLV  E G    +E+++
Sbjct:  417 TLKDYVADLKENQTAIYYITGDLAR-VEHAPQLEGFRARGVEVLLLPDQVDSFWVTAGVDYEGKPFKSVTQGAADLSLIPLPKSDEAETPEPEAKDTGDFIAFVKETLGDQVADVRASDRLTTSAVCLVAPESGIDRRLEKLL 558

HSP 2 Score: 30.0314 bits (66), Expect = 1.476e-13
Identity = 16/65 (24.62%), Postives = 29/65 (44.62%), Query Frame = 1 
Query:  478 SSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLK 672
            ++K  +EINP +P++  L     +D N ++  D             G    DP  F  R+ R+++
Sbjct:  567 AAKPVLEINPRHPLVAALAAHGASDSNFRA--DAAHLLLDQARVLDGDQPSDPQAFAERLMRVMQ 629
The following BLAST results are available for this feature:
BLAST of FC930340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
HTPG_ALKMQ6.379e-1431.25Chaperone protein htpG OS=Alkaliphilus metalliredi... [more]
HTPG_RICRS8.753e-1425.33Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICRO8.753e-1425.33Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_WOLSU8.754e-1431.25Chaperone protein htpG OS=Wolinella succinogenes G... [more]
HTPG_WIGBR1.088e-1330.00Chaperone protein htpG OS=Wigglesworthia glossinid... [more]
HTPG_RICM51.137e-1325.33Chaperone protein htpG OS=Rickettsia massiliae (st... [more]
HTPG_BORBU1.137e-1329.53Chaperone protein htpG OS=Borrelia burgdorferi GN=... [more]
HTPG_EXIS21.421e-1331.94Chaperone protein htpG OS=Exiguobacterium sibiricu... [more]
HTPG_CLOTE1.421e-1332.17Chaperone protein htpG OS=Clostridium tetani GN=ht... [more]
HTPG_AZOC51.476e-1330.77Chaperone protein htpG OS=Azorhizobium caulinodans... [more]

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Properties
Property NameValue
Genbank descriptionC34006E01EF PostHarvC1 Citrus clementina cDNA clone C34006E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930340 ID=FC930340; Name=FC930340; organism=Citrus clementina; type=EST; length=714bp
GTGGTGATGAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAA
GGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGA
GAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCT
ACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTT
GAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGA
GAGTGAAGATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGG
GTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTT
GTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGA
GTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTTG
AGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGAT
CAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGG
ACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACT
GCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAA
CAGAATCCACAGGATGTTGAAAACTCGGGCTGAGCATCGAGAAGATGCTG
GTGATGCTGATGCT
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