FC930340

Overview
NameFC930340
Unique NameFC930340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF5 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.114e-26
Identity = 62/147 (42.18%), Postives = 83/147 (56.46%), Query Frame = 3
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFE 452
            SL DY+ RM EGQ+ IYYIT +S  A +NSP LE L+KKG EVL + D +DE+    L EFEGK L S  K  L L   E+E+E+K +E  ++  EGL + IK+ LG               P C+V GE      M++++K    E
Sbjct:  416 SLADYLARMAEGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLKQAGHE 562          

HSP 2 Score: 30.8018 bits (68), Expect = 1.114e-26
Identity = 17/64 (26.56%), Postives = 31/64 (48.44%), Query Frame = 1
Query:  478 SSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            S+K  +EINP +P++     R + +K+D    +             G  L+DP  F  RI++++
Sbjct:  565 STKPVLEINPTHPMLA----RIEGEKDDTRFAEWSALLLDQAILAEGGQLEDPAGFVARINQLM 624          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF2 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.114e-26
Identity = 62/147 (42.18%), Postives = 83/147 (56.46%), Query Frame = 3
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFE 452
            SL DY+ RM EGQ+ IYYIT +S  A +NSP LE L+KKG EVL + D +DE+    L EFEGK L S  K  L L   E+E+E+K +E  ++  EGL + IK+ LG               P C+V GE      M++++K    E
Sbjct:  416 SLADYLARMAEGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLKQAGHE 562          

HSP 2 Score: 30.8018 bits (68), Expect = 1.114e-26
Identity = 17/64 (26.56%), Postives = 31/64 (48.44%), Query Frame = 1
Query:  478 SSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            S+K  +EINP +P++     R + +K+D    +             G  L+DP  F  RI++++
Sbjct:  565 STKPVLEINPTHPMLA----RIEGEKDDTRFAEWSALLLDQAILAEGGQLEDPAGFVARINQLM 624          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA7 (Chaperone protein htpG OS=Pseudomonas aeruginosa (strain PA7) GN=htpG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.887e-26
Identity = 58/148 (39.19%), Postives = 83/148 (56.08%), Query Frame = 3
Query:    3 GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLD--ESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            G++  +L DY+ RMKEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L +F+GK  V   +  L L   +SE++KK +E + +  EGL + +K VL                P  L  GE      M +I++A
Sbjct:  416 GEQSVALADYIGRMKEGQDKIYYLTGESYSQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLPDFDGKSFVDVARGDLDLGSLDSEEDKKAQEEVAKSKEGLIERLKKVLDEQASEVRVSHRLTDSPAILAIGEQDLGLQMRQILEA 563          

HSP 2 Score: 35.039 bits (79), Expect = 1.887e-26
Identity = 20/78 (25.64%), Postives = 39/78 (50.00%), Query Frame = 1
Query:  436 RLRPLRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            ++R + + S      SK   EINP++P++E+L    DA+ ++    +            +G SL DP  +  R++++L
Sbjct:  556 QMRQILEASGQKVPESKPIFEINPQHPLIEKL----DAEPDEDRFGELSHILFDQAALAAGDSLKDPGAYVRRLNKLL 629          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.261e-26
Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 3
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVL 329
            +L  LKD    MK  Q  IYYITGE+K  V NS F+E L+K G EV+YM++ ID+Y V QLKE E K +VS  KEGL+L E E+EKK +E  K KFE LCK++KD+L
Sbjct:  158 QLEELKDSRRVMKANQKHIYYITGETKDQVANSAFVECLQKHGLEVIYMIELIDKYCVQQLKELESKTVVSVAKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDML 264          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_PSEMY (Chaperone protein htpG OS=Pseudomonas mendocina (strain ymp) GN=htpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.048e-26
Identity = 62/150 (41.33%), Postives = 84/150 (56.00%), Query Frame = 3
Query:    3 GDELT-SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGL---KLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            GDE + SL DY+ R+K+GQ+ IYY+TGES   ++NSP LE  +KKG EVL + D IDE+ +  L EF+GK+ V   +  L   KLD  ED+K  +E  K K EGL + +K  LG               P  L  GE      M +I++A
Sbjct:  415 GDEQSVSLADYLGRVKDGQDKIYYLTGESYAQIKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKQFVDVARGDLDLGKLDSEEDKKAQEEVAKAK-EGLIERLKGALGEQVKEVRVSHRLTDSPAILAIGEQDLGLQMRQILEA 563          

HSP 2 Score: 33.8834 bits (76), Expect = 7.048e-26
Identity = 21/78 (26.92%), Postives = 35/78 (44.87%), Query Frame = 1
Query:  436 RLRPLRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            ++R + + S      SK   E NP +P++E L   AD D+      D            +G SL DP  +  R++++L
Sbjct:  556 QMRQILEASGQKVPESKPIFEFNPSHPLIERLDAEADEDR----FVDLTHILFDQAALAAGDSLKDPAAYVQRLNKLL 629          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_BORA1 (Chaperone protein htpG OS=Bordetella avium (strain 197N) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.194e-25
Identity = 60/150 (40.00%), Postives = 88/150 (58.67%), Query Frame = 3
Query:    9 ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDE--SEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQAFE 452
            + TSL+DY+ R+KEGQ+ IYY+T +S  A  NSP LE  +KKG EVL + D +DE+ +  L+EFEGK LVS  K GL L +   E+EKK +  + E F+ L + ++  LG               P C+V G+   + ++ R++KA   E
Sbjct:  417 QTTSLQDYLGRLKEGQDKIYYVTADSYSAASNSPHLEIFRKKGIEVLLLWDRVDEWMLSHLREFEGKSLVSVAKGGLDLADLADEEEKKKQTEVAESFKPLIERLQTALGEQVKEVRVTLRLVDSPACVVVGQNDLSPHLLRMLKAAGQE 566          

HSP 2 Score: 25.7942 bits (55), Expect = 1.194e-25
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 1
Query:  484 KKTMEINPENPIMEELRKRADAD 552
            K  +EINPE+ ++  +R  +DAD
Sbjct:  571 KPVLEINPEHALIARIRDVSDAD 593          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.194e-25
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +K  ++L + E  +++KE  ++  E L K IK VL                P C+V  E      M+RI++A
Sbjct:  415 SLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFTGKKLQSISKGKVELGDDETSEQIKEQ-EKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          

HSP 2 Score: 30.0314 bits (66), Expect = 1.194e-25
Identity = 19/63 (30.16%), Postives = 28/63 (44.44%), Query Frame = 1
Query:  481 SKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            SK   EINPE+ +++ L    D    D   +              G  LD+P  F NR++R+L
Sbjct:  562 SKPIFEINPEHALIKRLHDIQD----DNQFELWVTMLFEQAVLAEGGQLDNPADFVNRVNRLL 620          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPA (Chaperone protein htpG OS=Legionella pneumophila (strain Paris) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.023e-25
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +K  ++L + E  +++KE  ++  E L K IK VL                P C+V  E      M+RI++A
Sbjct:  415 SLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSISKGKIELGDDETSEQIKEQ-EKTLEPLIKHIKSVLNDRVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          

HSP 2 Score: 28.8758 bits (63), Expect = 2.023e-25
Identity = 18/63 (28.57%), Postives = 28/63 (44.44%), Query Frame = 1
Query:  481 SKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            SK   EINP++ +++ L    D    D   +              G  LD+P  F NR++R+L
Sbjct:  562 SKPIFEINPDHALIKRLHDIQD----DNQFELWVTMLFEQAVLAEGGQLDNPADFVNRVNRLL 620          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.633e-25
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +K  ++L + E  +++KE  ++  E L K IK VL                P C+V  E      M+RI++A
Sbjct:  415 SLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSISKGKVELGDDETSEQIKEQ-EKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          

HSP 2 Score: 28.8758 bits (63), Expect = 2.633e-25
Identity = 18/63 (28.57%), Postives = 28/63 (44.44%), Query Frame = 1
Query:  481 SKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            SK   EINP++ +++ L    D    D   +              G  LD+P  F NR++R+L
Sbjct:  562 SKPIFEINPDHALIKRLHDIQD----DNQFELWVTMLFEQAVLAEGGQLDNPADFVNRVNRLL 620          
BLAST of FC930340 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.633e-25
Identity = 59/141 (41.84%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   18 SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKA 440
            SL++Y++RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +K  ++L + E  +++KE  ++  E L K IK VL                P C+V  E      M+RI++A
Sbjct:  415 SLEEYISRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSISKGKIELGDDETSEQIKEQ-EKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQA 554          

HSP 2 Score: 28.8758 bits (63), Expect = 2.633e-25
Identity = 18/63 (28.57%), Postives = 28/63 (44.44%), Query Frame = 1
Query:  481 SKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRML 669
            SK   EINP++ +++ L    D    D   +              G  LD+P  F NR++R+L
Sbjct:  562 SKPIFEINPDHALIKRLHDIQD----DNQFELWVTMLFEQAVLAEGGQLDNPADFVNRVNRLL 620          
The following BLAST results are available for this feature:
BLAST of FC930340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 351
Match NameE-valueIdentityDescription
HTPG_ACIF51.114e-2642.18Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_ACIF21.114e-2642.18Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_PSEA71.887e-2639.19Chaperone protein htpG OS=Pseudomonas aeruginosa (... [more]
HS905_HUMAN3.261e-2656.07Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]
HTPG_PSEMY7.048e-2641.33Chaperone protein htpG OS=Pseudomonas mendocina (s... [more]
HTPG_BORA11.194e-2540.00Chaperone protein htpG OS=Bordetella avium (strain... [more]
HTPG_LEGPL1.194e-2542.55Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPA2.023e-2542.55Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_LEGPH2.633e-2542.55Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_LEGPC2.633e-2541.84Chaperone protein htpG OS=Legionella pneumophila (... [more]

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Properties
Property NameValue
Genbank descriptionC34006E01EF PostHarvC1 Citrus clementina cDNA clone C34006E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930340 ID=FC930340; Name=FC930340; organism=Citrus clementina; type=EST; length=714bp
GTGGTGATGAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAA
GGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGA
GAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCT
ACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTT
GAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGA
GAGTGAAGATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGG
GTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTT
GTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGA
GTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTTG
AGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGAT
CAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGG
ACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACT
GCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAA
CAGAATCCACAGGATGTTGAAAACTCGGGCTGAGCATCGAGAAGATGCTG
GTGATGCTGATGCT
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