FC930341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.570e-33 Identity = 69/143 (48.25%), Postives = 94/143 (65.73%), Query Frame = 2 Query: 209 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 K+ K Y KL LLE+Y I + + DNV S Q+H IR+ L G++VVLMGKNTM++R ++ T + L+P + GNVG +FT GDLKEV+ ++ KV APAR G +AP DV +P GNTG++ +TSF Q L +PTK Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADTPE--YERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPAGNTGMEPGKTSFFQALGVPTK 144
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32 Identity = 68/143 (47.55%), Postives = 92/143 (64.34%), Query Frame = 2 Query: 209 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 K+ K Y KL LLEEY I + + DNV S Q+H IR+ L VVLMGKNTM++R ++ + + L+P + GNVG +FT GDLKE++ ++ KV APAR G VAP+DV +P GNTG++ +TSF Q L +PTK Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL--VDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAGNTGMEPGKTSFFQALGVPTK 144
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_RANSY (60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.337e-30 Identity = 72/146 (49.32%), Postives = 91/146 (62.33%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL++Y + + ADNVGS Q+ IR L G +VVLMGKNTMM++ IR H E N+A L+P + GNVG +FTK DL EV+ + KV A AR G +AP DV VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.052e-30 Identity = 72/146 (49.32%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL++Y + V ADNVGS Q+ IR L G +VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL E++ + KV A AR G +AP DV VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.160e-29 Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL++Y + + ADNVGS Q+ IR L G +VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL E++ + KV A AR G +AP +V VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.160e-29 Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL++Y + + ADNVGS Q+ IR L G +VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL E++ + KV A AR G +AP +V VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.160e-29 Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL++Y + + ADNVGS Q+ IR L G +VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL E++ + KV A AR G +AP +V VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.160e-29 Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL++Y + + ADNVGS Q+ IR L G +VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL E++ + KV A AR G +AP +V VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.160e-29 Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL++Y + + ADNVGS Q+ IR L G +VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL E++ + KV A AR G +AP +V VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146
BLAST of FC930341 vs. ExPASy Swiss-Prot
Match: RLA0_ICTPU (60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29 Identity = 70/146 (47.95%), Postives = 89/146 (60.96%), Query Frame = 2 Query: 200 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLHNIRRGLPGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLHGNVGLIFTKGDLKEVKQEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDSSQTSFCQVLHIPTK 637 + +A K Y K+ QLL +Y + + ADNVGS Q+ IR L G ++VLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL EV+ + KV A AR G +AP +V VP NTGL +TSF Q L I TK Sbjct: 3 REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTK 146 The following BLAST results are available for this feature:
BLAST of FC930341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930341 ID=FC930341; Name=FC930341; organism=Citrus clementina; type=EST; length=639bpback to top |