FC930343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.061e-40 Identity = 88/161 (54.66%), Postives = 113/161 (70.19%), Query Frame = 1 Query: 43 SKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQAT-LFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 507 S KI LKSSDG++FE+DE VA +S I HM+ED CA + IPL NVTSKIL VI+YC+KHV++ + ++DLK WD DF+K + T LFD+++AANYLNI+SLLDLTC+TV AD++ GKTP+EIR FNI+ND T NQWAF+ Sbjct: 2 STKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKSKE---------EEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.364e-40 Identity = 92/171 (53.80%), Postives = 114/171 (66.67%), Query Frame = 1 Query: 40 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHV--EASKSDD--RATS-----GVDDDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE*KDLK 522 +S KI L SSD E+FEV+EAVA + + I HMI+DDCAD IPL NVT IL+ VIEYCKKHV + SDD ATS ++L+ WD +F+K D T+ LILA NYLN++ LL LTCQTVAD +K +PEE+R+ FNI+ND+TP N WAFE DLK Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE--DLK 170
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.032e-40 Identity = 85/152 (55.92%), Postives = 111/152 (73.03%), Query Frame = 1 Query: 52 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 498 + L+SSD + FE+++ +A S TIK+MIED +D+ IPLPNVTS IL KV++YC+ H + + + DD+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.983e-40 Identity = 85/152 (55.92%), Postives = 110/152 (72.37%), Query Frame = 1 Query: 52 ITLKSSDGEAFEVDEAVALESQTIKHMIED-DCADNGIPLPNVTSKILSKVIEYCKKHVE--ASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQW 498 + L+SSD + FE+++ +A S TIK+MIED +D IPLPNVTS IL KV++YC+ H + + + DD+ DD+ +D DF KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDFTP N+W Sbjct: 4 VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCRHHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.001e-39 Identity = 91/189 (48.15%), Postives = 113/189 (59.79%), Query Frame = 1 Query: 40 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVE----------------------ASKSDD----RATSGVD------DDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 507 +SKKI L SSDGE+F+V+E VA + Q + H+IEDDCA N IP+PNVT +IL+KVIEYCKKHVE K DD +T G D + L WD F+K D T+FD+ILAANYLN++ L DL +T+AD IK TPEE+R+ FNI+NDFTP N W FE Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 81/156 (51.92%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 40 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAFE 507 ++KKI LKSS+G+ FE++E A + QTI HMIE +C DN I + +TS+IL VIEYC KH D A DDDL+ WD +F++ D++T+F L AAN+LN KSLL L QTVADMIKG TP+++R+ FNI+ND TP N+WAFE Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKH-----HVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 82/156 (52.56%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 40 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFV-KVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 504 +S KI L SSDGE+FE+DEAVA + I HM+ED+CA IPL NVT ILSK+IEY K HV +D +L +WD F+ K+D T+F +ILAANYLN + LL QTVAD IK KTPEE+R+ FNI+NDFTP N W F Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPSEEDE-DEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 77/156 (49.36%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 49 KITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADN-GIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGV----DDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWA 501 KI L SSD E F VD+ +A S IK+M+ED N IPLPNV+S +L KV+E+C+ H S S + D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI NDFTP N+WA Sbjct: 3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.620e-34 Identity = 76/156 (48.72%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 40 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVK-VDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXXNQWAF 504 +SKKI L SSD E FE+DEAVA + Q + HMI+DDCAD I L NVT KIL+ +IEYCKKHV+ ++ ++ WD +FVK +D TLF L+ AA+YL + L +L Q +AD KT EIR+ FNI+ND+TP N+WAF Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHVDDVEA--------KNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149
BLAST of FC930343 vs. ExPASy Swiss-Prot
Match: ASK7_ARATH (SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 40 TSKKITLKSSDGEAFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVEASKSDDRATSGVDDDLKAWDTDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 402 ++KKI LKSSDG+ FE++E A + QTI HMIE +C DN IP+ NVTS+IL VIEYC KH D A D+DLK WD +F++ DQ T+F L+ AA L+IKSLL L QTVADM+ Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCNKH-----HVDAANPCSDEDLKKWDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117 The following BLAST results are available for this feature:
BLAST of FC930343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930343 ID=FC930343; Name=FC930343; organism=Citrus clementina; type=EST; length=717bpback to top |