FC930351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_CYAP8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.372e-56 Identity = 107/161 (66.46%), Postives = 135/161 (83.85%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I++LGSTGSIGTQTLDIV ++ D+F+VV LA +N LLA Q+K+F+P++VA+ ES L+ IK+A+A+++ P +L GE GV+E AR+ D+ +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL KH +K+LPADSEHSAIFQC+QG Sbjct: 2 KKITILGSTGSIGTQTLDIVQQYPDQFQVVGLATRNNGELLAQQIKQFRPEIVAICQESQLNTIKDAIASLDYSPILLTGEAGVVEVARYGDSESVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNP6 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dxr PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.301e-54 Identity = 103/161 (63.98%), Postives = 132/161 (81.99%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P IL GE GV E AR+ DA VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL KH + I PADSEHSAIFQCIQG Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNE7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus elongatus (strain PCC 7942) GN=dxr PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.301e-54 Identity = 103/161 (63.98%), Postives = 132/161 (81.99%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K +++LGSTGSIGTQTLDI+ ++ D+FR+V LAAG N+ LL++Q++R +P++VA+++ + L E++ A+A+++ P IL GE GV E AR+ DA VVTGIVGCAGL PT+AAIEAGKDIALANKETLIA GP VLPL KH + I PADSEHSAIFQCIQG Sbjct: 2 KAVTLLGSTGSIGTQTLDILEQYPDRFRLVGLAAGRNVALLSEQIRRHRPEIVAIQDAAQLSELQAAIADLDNPPLILTGEAGVTEVARYGDAEIVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAAGPVVLPLLQKHGVTITPADSEHSAIFQCIQG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_CYAP4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.301e-54 Identity = 103/161 (63.98%), Postives = 135/161 (83.85%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I++LGSTGSIGTQTLDIVA++ D+FR+V LAAG ++ L Q+++F+PQ+VA+ +E LD++K A+A+++ +P ++AG GV E A + DA TVVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL ++ +K+LPADSEHSAIFQC+QG Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQLDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNY3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechocystis sp. (strain PCC 6803) GN=dxr PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.946e-54 Identity = 106/162 (65.43%), Postives = 129/162 (79.63%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE-KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K IS+LGSTGSIGTQTLDIV H D F+VV LAAG N+ LLA QV F+P++VA+R L+++K A+A + + +P + GE+GV+E AR+ DA +VVTGIVGCAGL PT+AAI AGKDIALANKETLIAG P VLPL K +K+LPADSEHSAIFQC+QG Sbjct: 3 KRISILGSTGSIGTQTLDIVTHHPDAFQVVGLAAGGNVALLAQQVAEFRPEIVAIRQAEKLEDLKAAVAELTDYQPMYVVGEEGVVEVARYGDAESVVTGIVGCAGLLPTMAAIAAGKDIALANKETLIAGAPVVLPLVEKMGVKLLPADSEHSAIFQCLQG 164
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_THEEB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dxr PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.879e-53 Identity = 100/161 (62.11%), Postives = 133/161 (82.61%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K +++LGSTGSIGTQTLDIVA++ D+FRVV LAAG N+ L Q+++F+P++V++ + L E++ ALA++ +KP+++AGE G+ A + DA VVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL ++ +K+LPADSEHSAIFQC+QG Sbjct: 20 KALNLLGSTGSIGTQTLDIVAQYPDRFRVVGLAAGRNLERLIPQIRQFQPEIVSIADPEQLPELEAALADLPQKPQLVAGEAGIAAVAAYGDAEVVVTGIVGCAGLVPTIAAIKAGKDIALANKETLIAGGPVVLPLLQEYGVKLLPADSEHSAIFQCLQG 180
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNJA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxr PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.879e-53 Identity = 100/159 (62.89%), Postives = 129/159 (81.13%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 I++LGSTGSIGTQTLD+VA++ ++FRVV L + SN+TLLA+QV RF+PQ+VA+ E LL E++ L + PE++AG +G+ + A HP A VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL ++ +K++P DSEHSAIFQC+QG Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFRVVGLTSYSNVTLLAEQVWRFRPQIVAIGREELLPELRSLLTGMRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVKLIPVDSEHSAIFQCLQG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNJB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. GN=dxr PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.078e-52 Identity = 97/159 (61.01%), Postives = 128/159 (80.50%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 I++LGSTGSIGTQTLD+VA++ ++F+VV L + SN+ LLA+QV+RF+PQ+VA+ E LL E++ L + PE++AG +G+ + A HP A VVTGIVGCAGL PT+AAI AGKDIALANKETL+AGGP VLPL ++ + ++P DSEHSAIFQC+QG Sbjct: 4 ITLLGSTGSIGTQTLDLVAQYPERFQVVGLTSYSNVALLAEQVRRFRPQMVAIGREELLPELRSLLTGIRPLPELVAGTEGLCQVAAHPAAQRVVTGIVGCAGLLPTLAAIRAGKDIALANKETLVAGGPVVLPLVREYGVNLIPVDSEHSAIFQCLQG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PROM9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9312) GN=dxr PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.808e-49 Identity = 98/163 (60.12%), Postives = 129/163 (79.14%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE--EKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I+VLGSTGSIGTQTL+I +E DKF+ VAL+AG NITLL +QVK KP+VVA+ +E+L++++K+ + N++ P +L G++G+ A A TV+TGIVGCAGL PT++AI AGK+IALANKETLIA GP V+P K+N ++LPADSEHSAIFQC+QG Sbjct: 2 KYITVLGSTGSIGTQTLEIASEQPDKFKAVALSAGRNITLLTEQVKTHKPEVVAIEDENLIEDLKDNINNLDLDSAPLVLGGKEGINAVAAWDKADTVITGIVGCAGLIPTMSAINAGKNIALANKETLIAAGPIVIPALKKNNSRLLPADSEHSAIFQCLQG 164
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_GLOVI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Gloeobacter violaceus GN=dxr PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.628e-47 Identity = 93/161 (57.76%), Postives = 120/161 (74.53%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I++LGSTGSIGTQTLDIVAE+ ++F V + A SN+ LLA+Q++RF+PQVVAV +E+ + LA + PE+ GE+G A A VVTGIVGCAGL PT+AA++AG+D+ALANKETL+AGGP V+P +K+LP DSEHSAIFQC+QG Sbjct: 2 KHIALLGSTGSIGTQTLDIVAEYPERFAVTGMTAHSNMELLAEQIRRFRPQVVAVGSEARRAALAALLAGFDGMPEMFVGEKGCCTVASQAPAEVVVTGIVGCAGLMPTLAAVDAGRDLALANKETLVAGGPVVMPRIRARGVKLLPVDSEHSAIFQCLQG 162 The following BLAST results are available for this feature:
BLAST of FC930351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930351 ID=FC930351; Name=FC930351; organism=Citrus clementina; type=EST; length=721bpback to top |