FC930351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_BACFR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides fragilis GN=dxr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34 Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I++LGSTGSIGTQ L ++ EH + + V AL A + + LL Q ++F P+ V + NE ++KEAL+++ K + AG + + V+T +VG AGLKPT+ AI AGK IALANKETL+ G + LA ++ ILP DSEHSA+FQC+ G Sbjct: 7 KQIAILGSTGSIGTQALQVIEEHPELYEVYALTANNKVDLLIAQARKFMPEAVVIANEEKYAQLKEALSDLPVK--VYAGAAALCQIVESGPIDVVLTAMVGYAGLKPTMNAIRAGKAIALANKETLVVAGELINQLARQYRTPILPVDSEHSAVFQCLAG 165
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_BACFN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dxr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34 Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I++LGSTGSIGTQ L ++ EH + + V AL A + + LL Q ++F P+ V + NE ++KEAL+++ K + AG + + V+T +VG AGLKPT+ AI AGK IALANKETL+ G + LA ++ ILP DSEHSA+FQC+ G Sbjct: 7 KQIAILGSTGSIGTQALQVIEEHPELYEVYALTANNKVDLLIAQARKFMPEAVVIANEEKYAQLKEALSDLPVK--VYAGAAALCQIVESGPIDVVLTAMVGYAGLKPTMNAIRAGKAIALANKETLVVAGELINQLARQYRTPILPVDSEHSAVFQCLAG 165
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_CLOBH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34 Identity = 69/161 (42.86%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I++LG+TGSIGTQTLD++ +++ ++VA++A + + + +K FKP+ + E+ +++ + + ++L G +G+I + + TVVT +VG GL PT+ AIE+GKDIALANKETL+ G V+ A +HN+ ILP DSEH AIFQC++G Sbjct: 2 KNITILGATGSIGTQTLDVIRREKEELKLVAISANKSDKKVIEIIKEFKPKYAVLMEENAFKIVEDFCIDNKIDTKVLKGMEGMIYISTLEEVNTVVTSVVGMIGLVPTIKAIESGKDIALANKETLVVAGELVISKAKEHNVNILPVDSEHGAIFQCLRG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_CLOB1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=dxr PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34 Identity = 69/161 (42.86%), Postives = 108/161 (67.08%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I++LG+TGSIGTQTLD++ +++ ++VA++A + + + +K FKP+ + E+ +++ + + ++L G +G+I + + TVVT +VG GL PT+ AIE+GKDIALANKETL+ G V+ A +HN+ ILP DSEH AIFQC++G Sbjct: 2 KNITILGATGSIGTQTLDVIRREKEELKLVAISANKSDKKVIEIIKEFKPKYAVLMEENAFKIVEDFCIDNKIDTKVLKGMEGMIYISTLEEVNTVVTSVVGMIGLVPTIKAIESGKDIALANKETLVVAGELVISKAKEHNVNILPVDSEHGAIFQCLRG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_MOOTA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Moorella thermoacetica (strain ATCC 39073) GN=dxr PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34 Identity = 82/162 (50.62%), Postives = 107/162 (66.05%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP--EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 718 K I+VLGSTGSIG QTL++VA H +FRV AL A N LLA QV+RF+P++ + +E E LA + P ILAGE+G++ AA VV +VG LK +AA+EAGKDIALANKE L+A G V+ A + + +I+P DSEHSAIFQC++ Sbjct: 3 KEITVLGSTGSIGRQTLEVVAAHPGRFRVAALVAARNDELLAAQVRRFRPRLAVLLDE----ERARVLAEMVSDPGIRILAGEEGLMAAACLEGVELVVAAMVGIRSLKAILAALEAGKDIALANKEVLVAAGQLVMDRARRLSRQIIPVDSEHSAIFQCLR 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_ANASK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaeromyxobacter sp. (strain K) GN=dxr PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34 Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K +++LGSTGSIG Q LD+V D+F VV LAAG N L +Q++RF+P+VV+V +E+ ++ A E+L+G+ G + A HPDA V+ I G AGL+ T AAIEAGK + LANKE+++ G ++ A + ILP DSEHSAI Q + G Sbjct: 2 KRVAILGSTGSIGVQALDVVGRFPDRFEVVGLAAGRNAPRLLEQIRRFRPRVVSVCDEAAARAVR---AEAPPGTEVLSGDAGAVAVASHPDAAFVLAAISGGAGLRSTAAAIEAGKPVGLANKESMVLAGELLMARAAAKGVPILPVDSEHSAIHQSLVG 159
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_ANAD2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=dxr PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34 Identity = 74/161 (45.96%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K +++LGSTGSIG Q LD+V D+F VV LAAG N L +Q++RF+P+VV+V +E+ ++ A E+L+G+ G + A HPDA V+ I G AGL+ T AAIEAGK + LANKE+++ G ++ A + ILP DSEHSAI Q + G Sbjct: 2 KRVAILGSTGSIGVQALDVVGRFPDRFEVVGLAAGRNAPRLLEQIRRFRPRVVSVCDEAAARAVR---AEAPPGTEVLSGDAGAVAVASHPDAAFVLAAISGGAGLRSTAAAIEAGKPVGLANKESMVLAGELLMARAAAKGVAILPVDSEHSAIHQSLVG 159
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_DESAP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulforudis audaxviator (strain MP104C) GN=dxr PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33 Identity = 78/159 (49.06%), Postives = 101/159 (63.52%), Query Frame = 2 Query: 236 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQC 712 PK I+VLGSTGSIG Q LD+V H +KF+VV LAAG N LLA+Q F P VV+V + + ++ L E+ AGE G+ A P A ++ + G GL PTV AI++GKD+ALANKETL+ G V LA ++ILP DSEHSA++QC Sbjct: 2 PKRIAVLGSTGSIGRQALDVVRSHPEKFKVVGLAAGRNWELLAEQAAEFAPGVVSVWSGDDAERVRVRLGG---GVEVHAGEPGLSAVATWPAADILLVAVAGTTGLVPTVEAIQSGKDVALANKETLVVAGELVTELALGRGVQILPVDSEHSAVWQC 157
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_CLONN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium novyi (strain NT) GN=dxr PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 73/161 (45.34%), Postives = 105/161 (65.22%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I +LG+TGSIGTQTLD++ + +KF++VA +A + + +++F P A+ ++ ++K+ K +L G G+I+ + + VVT IVG GL PT+ AI AGKDIALANKETL+ GG V+ A ++N+KILP DSEH AIFQC+QG Sbjct: 2 KNICILGATGSIGTQTLDVIEKESNKFKLVAFSANKSYEKIITIIEKFNPVYGAINDKETFLKVKDHCNINNIKINLLYGMDGLIKISTLEEVELVVTSIVGMIGLVPTLEAINAGKDIALANKETLVTGGELVMKAAKQNNVKILPVDSEHGAIFQCLQG 162
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_CLOAB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium acetobutylicum GN=dxr PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 72/161 (44.72%), Postives = 105/161 (65.22%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K IS+LG+TGSIGTQTLD++ + F+++A++A SN + + + FKP++V + ++ +++ + + K + G + E A + D+ VVT IVG GL PT+ AI+AGKDIALANKETL+ G V A K+ + ILP DSEH AIFQC+QG Sbjct: 2 KNISILGATGSIGTQTLDVIRNDSEAFKLLAVSAHSNFKKMIEIIDEFKPELVVMVDKLAYNKVLDYCCEKKLKTSVKVGYEAFNEVASYKDSNIVVTSIVGMIGLIPTLEAIKAGKDIALANKETLVVAGELVTKEAKKYGVNILPVDSEHGAIFQCLQG 162 The following BLAST results are available for this feature:
BLAST of FC930351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930351 ID=FC930351; Name=FC930351; organism=Citrus clementina; type=EST; length=721bpback to top |