FC930351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_RALPJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ralstonia pickettii (strain 12J) GN=dxr PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.076e-32 Identity = 67/157 (42.68%), Postives = 97/157 (61.78%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 ++VLG+TGSIG TLD+V H DK+ V AL A + LA + F+P++ + + + D +++ L EI +G + + EAA HPD V+ IVG AGL+PT+AA+ AGK + LANKE L+ G + +H +LP DSEH+AIFQC+ Sbjct: 4 LTVLGATGSIGDSTLDVVRRHPDKYSVFALTANAQADKLAVLCREFRPKMAVLGSAAAADALRDQLGTEAAGIEICSGTKALEEAAAHPDCDAVMAAIVGAAGLRPTLAAVRAGKRVLLANKEALVMSGALFMDAVREHGATVLPIDSEHNAIFQCL 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_TOLAT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=dxr PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31 Identity = 68/157 (43.31%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 +++LGSTGSIG TLDIV H D+F V AL A + + F P + +E+ +KEALA + K E+L G + + A H V+ IVG AGL P +AAI+ GK + LANKE L+ G + AH ++ +ILP DSEH+AIFQC+ Sbjct: 4 LTILGSTGSIGRSTLDIVRRHPDRFAVTALTANQGVAQMMSDCLEFHPSYAVMADEASAIALKEALAGHKLKTEVLTGTDALCQVAAHSSVDIVMAAIVGAAGLLPAMAAIKKGKTVLLANKEALVMSGRLFMDAAHHYSARILPVDSEHNAIFQCL 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PSE14 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dxr PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.641e-31 Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 2 Query: 233 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 GP+ I++LG+TGSIG TLD+VA H +++V AL S + L R PQ V ++ + ++++ LA +L GE G+ E A HP V+ IVG AGL+PT+AA+EAGK + LANKE L+ G + + +LP DSEH+AIFQC+ G Sbjct: 3 GPQHITILGATGSIGLSTLDVVARHPSRYQVFALTGFSRLDELLALCVRHTPQYAVVPDQFVARKLQDDLAAAVLDTRVLVGEGGLCEVAAHPRVDAVMAAIVGAAGLRPTLAAVEAGKKVLLANKEALVMSGDLFMQAVRQSGAVLLPIDSEHNAIFQCLPG 165
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_THERP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dxr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 71/158 (44.94%), Postives = 105/158 (66.46%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQ 718 +S+LGSTGSIG QTL++VA H D+FRVVALAA S I L +QV+ F+P++VA+ ESL + +++G G++EAA + A VV + G +G++PT+AA AGK IALANKE+++ GP + + + ++ P DSEHSA++Q +Q Sbjct: 5 VSLLGSTGSIGRQTLEVVAAHPDRFRVVALAARSQIDALQEQVRIFRPELVAIAQESLGISFPDT--------RVVSGPGGLVEAATYETADIVVIALSGNSGIEPTLAAAAAGKTIALANKESVVCAGPLLRDIQSRTGCQVRPVDSEHSALWQLLQ 154
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SALTY (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Salmonella typhimurium GN=dxr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 69/159 (43.40%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 K +++LGSTGSIG TLD+V + D FRV+AL AG N+ +A+Q F P+ + + S +++K L + E+L+G+Q E A + V+ IVG AGL PT+AAI AGK I LANKE+L+ G + + N ++LP DSEH+AIFQ + Sbjct: 2 KQLTILGSTGSIGCSTLDVVRHNPDSFRVIALVAGKNVARMAEQCLEFSPRYAVMDDTSSAEQLKIMLQQHGSRTEVLSGQQAACEMAALDEVGHVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDEVKRSNARLLPVDSEHNAIFQSL 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SALPA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Salmonella paratyphi A GN=dxr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 69/159 (43.40%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 K +++LGSTGSIG TLD+V + D FRV+AL AG N+ +A+Q F P+ + + S +++K L + E+L+G+Q E A + V+ IVG AGL PT+AAI AGK I LANKE+L+ G + + N ++LP DSEH+AIFQ + Sbjct: 2 KQLTILGSTGSIGCSTLDVVRHNPDSFRVIALVAGKNVARMAEQCLEFSPRYAVMDDTSSAEQLKIMLQQHGSRTEVLSGQQAACEMAALDEVGHVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDEVKRSNARLLPVDSEHNAIFQSL 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SALCH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Salmonella choleraesuis GN=dxr PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 69/159 (43.40%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 K +++LGSTGSIG TLD+V + D FRV+AL AG N+ +A+Q F P+ + + S +++K L + E+L+G+Q E A + V+ IVG AGL PT+AAI AGK I LANKE+L+ G + + N ++LP DSEH+AIFQ + Sbjct: 2 KQLTILGSTGSIGCSTLDVVRHNPDSFRVIALVAGKNVARMAEQCLEFSPRYAVMDDTSSAEQLKIMLQQHGSRTEVLSGQQAACEMAALDEVGHVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDEVKRSNARLLPVDSEHNAIFQSL 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_RALSO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Ralstonia solanacearum GN=dxr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 67/157 (42.68%), Postives = 97/157 (61.78%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 I+VLG+TGSIG TLD+V H D++RV AL A + + LA + F+P + V + + + +++ L +I G + + EAA HPD V+ IVG AGL+PT+AA+ AGK + LANKE L+ G + +H +LP DSEH+AIFQC+ Sbjct: 4 ITVLGATGSIGDSTLDVVRRHPDRYRVFALTANTQVDKLAALCRVFRPAMAVVGSATAAEVLRDQLGAEATGIDIRFGPEALEEAAAHPDCDAVMAAIVGAAGLRPTLAAVRAGKRVLLANKEALVMSGALFMDAVRQHGATVLPIDSEHNAIFQCL 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_LYSSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Lysinibacillus sphaericus (strain C3-41) GN=dxr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 73/163 (44.79%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEI--LAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K IS+LG+TGSIG QT DI+ E + F++VA ++G N+ + + KP++V+V+ E ++AL +E P I G QG++E A HP + +V ++G GL+ T+AAI GK IA+ANKETL+ G V+ A K+N ILP DSEHSAIFQ + G Sbjct: 2 KKISLLGATGSIGWQTYDILKEQREAFQLVAFSSGKNMEKTREMIDNLKPELVSVQLE------EDALLLAKEYPTIHFTFGAQGLVEVATHPASTVLVNAVLGSVGLESTLAAIRMGKTIAIANKETLVTAGHLVMAEAKKYNATILPVDSEHSAIFQSMNG 158
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SALTI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Salmonella typhi GN=dxr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31 Identity = 69/159 (43.40%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 K +++LGSTGSIG TLD+V + D FRV+AL AG N+ +A+Q F P+ + + S +++K L + E+L+G+Q E A + V+ IVG AGL PT+AAI AGK I LANKE+L+ G + + N ++LP DSEH+AIFQ + Sbjct: 2 KQLTILGSTGSIGCSTLDVVHHNPDSFRVIALVAGKNVARMAEQCLEFSPRYAVMDDTSSAEQLKIMLQQHGSRTEVLSGQQAACEMAALDEVGHVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDEVKRSNARLLPVDSEHNAIFQSL 160 The following BLAST results are available for this feature:
BLAST of FC930351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930351 ID=FC930351; Name=FC930351; organism=Citrus clementina; type=EST; length=721bpback to top |