FC930351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_ACIBT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dxr PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA--NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 + +LG TGSIG TL I+ +H DK+ V A++A S I+ L + K+F+P+VV V + + E+K A N+ + ++LAG++G+++ A H D V+ IVG AGL PT+AA++AGK + LANKE L+ G ++ A H +LP DSEH+AIFQ + Sbjct: 5 VCILGVTGSIGRSTLKILGQHPDKYSVFAVSAHSRISELVEICKQFRPKVVVVPEQKIA-ELKTLFAQQNISDI-DVLAGQEGLVDIASHTDVDIVMAAIVGAAGLLPTLAAVKAGKRVLLANKEALVMSGEIMMQAARDHQALLLPVDSEHNAIFQSL 161
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_ACIB5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acinetobacter baumannii (strain AB0057) GN=dxr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA--NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 + +LG TGSIG TL I+ +H DK+ V A++A S I+ L + K+F+P+VV V + + E+K A N+ + ++LAG++G+++ A H D V+ IVG AGL PT+AA++AGK + LANKE L+ G ++ A H +LP DSEH+AIFQ + Sbjct: 5 VCILGVTGSIGRSTLKILGQHPDKYSVFAVSAHSRISELVEICKQFRPKVVVVPEQKIA-ELKTLFAQQNISDI-DVLAGQEGLVDIASHTDVDIVMAAIVGAAGLLPTLAAVKAGKRVLLANKEALVMSGEIMMQAARDHQALLLPVDSEHNAIFQSL 161
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_ACIB3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acinetobacter baumannii (strain AB307-0294) GN=dxr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA--NVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 + +LG TGSIG TL I+ +H DK+ V A++A S I+ L + K+F+P+VV V + + E+K A N+ + ++LAG++G+++ A H D V+ IVG AGL PT+AA++AGK + LANKE L+ G ++ A H +LP DSEH+AIFQ + Sbjct: 5 VCILGVTGSIGRSTLKILGQHPDKYSVFAVSAHSRISELVEICKQFRPKVVVVPEQKIA-ELKTLFAQQNISDI-DVLAGQEGLVDIASHTDVDIVMAAIVGAAGLLPTLAAVKAGKRVLLANKEALVMSGEIMMQAARDHQALLLPVDSEHNAIFQSL 161
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_DESDG (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfovibrio desulfuricans (strain G20) GN=dxr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.504e-30 Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 2 Query: 236 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 P+ + +LGSTGSIGT L +V + FR+ ALA N+ LLA Q ++P +AV N + DE+ L +P I G++G A P+A V++ VG AGL+ TVAA AGK IALANKE+L+ G + L H+ +LP DSEH+AIFQ +QG Sbjct: 18 PRSLVLLGSTGSIGTSALRVVERQPELFRITALAGARNVRLLARQAAAYRPPHLAVINGNAADELASLLP-AGYRPRIHTGQEGYEFLAALPEADCVLSAQVGAAGLRATVAAARAGKTIALANKESLVLAGGLIRRLCHETGASVLPVDSEHNAIFQALQG 178
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_ACIBS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acinetobacter baumannii (strain SDF) GN=dxr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.504e-30 Identity = 68/158 (43.04%), Postives = 101/158 (63.92%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKP-EILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 + +LG TGSIG TL I+ +H DK+ V A++A S I+ L + K+F+P+VV V + + E+K A ++LAG++G+++ A H D V+ IVG AGL PT+AA++AGK + LANKE L+ G ++ A H +LP DSEH+AIFQ + Sbjct: 5 VCILGVTGSIGQSTLKILGQHPDKYSVFAVSAHSRISELVEICKQFRPKVVVVPEQKIA-ELKTLFAQQNISAIDVLAGQEGLVDIASHTDVDIVMAAIVGAAGLLPTLAAVKAGKRVLLANKEALVMSGEIMMQAARDHQALLLPVDSEHNAIFQSL 161
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PSESM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pseudomonas syringae pv. tomato GN=dxr PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.495e-30 Identity = 68/163 (41.72%), Postives = 95/163 (58.28%), Query Frame = 2 Query: 233 GPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 GP+ I++LG+TGSIG TLD+VA H ++V AL S + L + PQ V + ++++ LA +L GE G+ E A HP V+ IVG AGL+PT+AA+EAGK + LANKE L+ G + + +LP DSEH+AIFQC+ G Sbjct: 3 GPQHITILGATGSIGLSTLDVVARHPTLYQVFALTGFSRLDELLALCIKHTPQYAVVPEQVAARKLQDDLAAAGLDTRVLVGEGGLCEVAAHPMVDAVMAAIVGAAGLRPTLAAVEAGKKVLLANKEALVMSGALFMQAVRQSGAVLLPIDSEHNAIFQCLPG 165
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SHIFL (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Shigella flexneri GN=dxr PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29 Identity = 67/159 (42.14%), Postives = 97/159 (61.01%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 K +++LGSTGSIG TLD+V + + FRVVAL AG N+T + +Q F P+ + +E+ +K L + E+L+G+Q + A + V+ IVG AGL PT+AAI AGK I LANKE+L+ G + + ++LP DSEH+AIFQ + Sbjct: 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEEVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_BACSU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus subtilis GN=dxr PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29 Identity = 71/161 (44.10%), Postives = 105/161 (65.22%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I +LG+TGSIG QTLD++ H+D+F++V+++ G NI ++ F+P+ V+V + ++K+ + E +I GE+G+IEAA + VV ++G GL PT+ AIE K IALANKETL+ G V A K+++ +LP DSEHSAIFQ +QG Sbjct: 2 KNICLLGATGSIGEQTLDVLRAHQDQFQLVSMSFGRNIDKAVPMIEVFQPKFVSVGDLDTYHKLKQMSFSFE--CQIGLGEEGLIEAAVMEEVDIVVNALLGSVGLIPTLKAIEQKKTIALANKETLVTAGHIVKEHAKKYDVPLLPVDSEHSAIFQALQG 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_RHOCS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxr PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29 Identity = 70/170 (41.18%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 200 AVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQ 709 +VT DG + ++VLGSTGS+G+ T++++ + +++R VAL A N+ LA Q +R +P+V V +E+ ++K+ALA AG V+EAA+ P A V+ IVG AGL+PT+AA G +A ANKE L+ G ++ +H +LP DSEHSAIFQ Sbjct: 4 SVTPRHSTGGDGIRSVTVLGSTGSVGSNTVELIEAYPERYRTVALVARRNVAALAGQARRLRPEVAVVADEAHYADLKDALAGT--GIAAAAGPAAVVEAAQRP-ADWVMAAIVGAAGLEPTLAAARRGAIVAFANKECLVCAGELLMAEVRRHGATLLPVDSEHSAIFQ 170
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_IDILO (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Idiomarina loihiensis GN=dxr PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29 Identity = 66/157 (42.04%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 245 ISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCI 715 I+VLG+TGSIG TL++V+ H D F+V AL A S I+ +A+ + PQ + + + E+K AL + +++ G+Q + E + + V+ IVG AGL PT+AAI+AGKD+ LANKE L+ G + A + +I+P DSEH+AIFQC+ Sbjct: 4 ITVLGATGSIGQNTLNVVSRHPDDFQVFALTAHSQISAMAELCVKHNPQYAVMGSYNAAAELK-ALLGQQTSTQVMYGDQALAEVSSDAEVDVVMAAIVGAAGLSPTLAAIDAGKDVLLANKEALVMSGQLFIDHAQRSGARIIPVDSEHNAIFQCL 159 The following BLAST results are available for this feature:
BLAST of FC930351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930351 ID=FC930351; Name=FC930351; organism=Citrus clementina; type=EST; length=721bpback to top |