FC930351
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.795e-46 Identity = 98/167 (58.68%), Postives = 123/167 (73.65%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K ISVLGSTGSIGTQTL IV + D+FRVVAL AG N+ LL +Q++R +P++VA+ +E+LL E+K+ L ++ PE++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+QG Sbjct: 2 KAISVLGSTGSIGTQTLQIVDDFPDQFRVVALTAGRNLALLVEQIQRHQPELVALADEALLPELKQRLEALDPSDRPAQCPEMVGGPDGLEVAASWGSAELVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQG 168
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNSC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9605) GN=dxr PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.442e-45 Identity = 98/165 (59.39%), Postives = 120/165 (72.73%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV----EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K ISVLGSTGSIGTQTL I E ++FRVVAL AG N+ LL +QV+R +P+VVA+ + LL E++E L + + P+++ G G+ AA A VVTGIVGCAGL PT+AAI AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+QG Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFRVVALTAGRNLKLLVEQVQRHRPEVVALADSDLLPELQERLKDAGVTGADAPQLVGGADGLNVAAAWDSADLVVTGIVGCAGLLPTLAAIRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQG 166
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.884e-45 Identity = 96/167 (57.49%), Postives = 122/167 (73.05%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K ISVLGSTGSIGTQTL I E D+F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+QG Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPDQFKIVALTAGKNLDLVTKQIETHQPEVVSLADESLLPELTRRINSLNEDSKILKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQG 168
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNS3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 97/167 (58.08%), Postives = 122/167 (73.05%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV------EEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K ISVLGSTGSIGTQTL IV + D+FRVVAL+AG N++LL Q++R +P VVA+ +++LL E+K+ L + E P ++ G +G+ A A VVTGIVGCAGL PT+AAI AGKD+A+ANKETLIA GP VLP K ++LPADSEHSAIFQC+QG Sbjct: 2 KAISVLGSTGSIGTQTLAIVEDFPDQFRVVALSAGRNLSLLVSQIQRHRPDVVALADQALLAELKDRLMALPADTRPEPLPHLVGGPEGLDVVASWDSADLVVTGIVGCAGLLPTLAAIRAGKDLAVANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQG 168
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEE------KPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K ISVLGSTGSIGTQTL I E ++F++VAL AG N+ L+ Q++ +P+VV++ +ESLL E+ + ++ E KP ++AG +G+ AA A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+QG Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFKIVALTAGKNLDLVIKQIETHQPEVVSLADESLLSELSSRINSLTENKKIVKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQG 168
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PROMP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dxr PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.595e-44 Identity = 92/159 (57.86%), Postives = 120/159 (75.47%), Query Frame = 2 Query: 251 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 +LGSTGSIGTQTL+IV+E DKF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+AGK+IALANKETLIA G V+P + ++LPADSEHSAIFQCIQG Sbjct: 1 MLGSTGSIGTQTLEIVSELPDKFKVVALSAGRNIDLLTEQVSQHKPEVIAIEDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKAGKNIALANKETLIAAGSVVIPALKESKSRLLPADSEHSAIFQCIQG 159
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PROM5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9515) GN=dxr PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.552e-44 Identity = 93/163 (57.06%), Postives = 122/163 (74.85%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN--VEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K I+VLGSTGSIGTQTL+IV E +KF+VVAL+AG NI LL +QV + KP+V+A+ +E+LL ++K + N + P +L G + + A A TV+TGIVGCAGL PT++AI+A K+IALANKETLIA G V+P ++ ++LPADSEHSAIFQCIQG Sbjct: 2 KYITVLGSTGSIGTQTLEIVRELPNKFKVVALSAGRNIDLLTEQVSQHKPEVIAIDDENLLTDLKNNINNLGISNPPIVLGGREAINSVAAWDSADTVITGIVGCAGLIPTMSAIKASKNIALANKETLIAAGSVVIPALKENKSRLLPADSEHSAIFQCIQG 164
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.034e-43 Identity = 92/160 (57.50%), Postives = 117/160 (73.12%), Query Frame = 2 Query: 251 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKE---ALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 +LGSTGSIGTQTL I E ++FRVVAL AG N+ LL Q++R +P++VA+ N LL E+++ AL ++P+++ G G+ AA A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+QG Sbjct: 1 MLGSTGSIGTQTLQIAEEFPEQFRVVALTAGQNLDLLVQQIQRHQPELVALANADLLPELQQRLDALGTDRKRPQLVGGPDGLNIAASWESADLVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQG 160
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.763e-43 Identity = 92/163 (56.44%), Postives = 122/163 (74.85%), Query Frame = 2 Query: 251 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEK------PEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 +LGSTGSIGTQTL+I E ++FRVVAL AG+N++L+ +Q++R P+VVA+ + SLL E+K+ L + + P++LAG +G+ AA A VV+GIVGCAGL PT+AAI+AGKD+ALANKETLIA P VLP + ++LPADSEHSAIFQC+QG Sbjct: 1 MLGSTGSIGTQTLEIAEEFPERFRVVALTAGTNVSLVVEQIQRHHPEVVALADASLLPELKQQLNALPSEQQPPHLPQLLAGPEGLNVAASWDSADLVVSGIVGCAGLLPTLAAIKAGKDLALANKETLIAAAPVVLPELKRSGSRLLPADSEHSAIFQCLQG 163
BLAST of FC930351 vs. ExPASy Swiss-Prot
Match: DXR_GEOUR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter uraniireducens (strain Rf4) GN=dxr PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.143e-42 Identity = 89/161 (55.28%), Postives = 114/161 (70.81%), Query Frame = 2 Query: 239 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQG 721 K +++LGSTGSIG TLDIVA H DKF+VVAL AG N+ LL Q++ F PQ+VAV NE L ++++ L+ + P IL G +G+I AA DA VV IVG AGL PT AAI+AGKDIALANKETL+ G ++ + H +K+ P DSEHSA+FQ +QG Sbjct: 2 KKLAILGSTGSIGVSTLDIVAAHPDKFQVVALTAGGNLDLLKKQIEEFSPQLVAVLNEELAQKLQQMLSG--KGPAILHGVEGMIAAATAADADMVVAAIVGAAGLVPTAAAIKAGKDIALANKETLVTAGRLIMDMVKAHGVKLYPVDSEHSAVFQSLQG 160 The following BLAST results are available for this feature:
BLAST of FC930351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 436
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930351 ID=FC930351; Name=FC930351; organism=Citrus clementina; type=EST; length=721bpback to top |