FC930352

Overview
NameFC930352
Unique NameFC930352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 4.848e-54
Identity = 102/205 (49.76%), Postives = 147/205 (71.71%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S   K++ +  +++ NE LF++LL  +++E+LP++YTPTVG+ACQ++  I+R  +GL+IS  E+ +I ++L++  +  I++IVVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGTNN +LL D  Y+G R  R +G+EY + +  F+ AV++ + + VL+QFEDFA  NA  LL KY      FNDDIQ
Sbjct:   66 SDLDKHIYLRSIQDNNETLFFRLLDSHLDEMLPIIYTPTVGQACQEFSKIYRTHRGLFISYPERDRIDDILRSATKDRIKIIVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNRELLDDPMYMGWRHERVSGKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 101/205 (49.27%), Postives = 144/205 (70.24%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S   K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL++S   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGTNN Q L D  Y+G R  R TG +Y   ++EF+ AV++ + +  LIQFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   66 SDMDKHIYLRNIQDTNETLFYRLVQNHITEMMPIIYTPTVGAACENFSNIYRRGRGLFVSYANRDRIDDILNNASNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNPQRLADPMYMGWRHPRITGADYDAFVEEFIQAVQRRWPD-ALIQFEDFAQKNAMPLLERYKNRICCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 98/201 (48.76%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G R +R  G+EY E ++ FM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDDIQ
Sbjct:   70 RHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFISYPHKDRIEDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGWRNQRIGGEEYKEFVEAFMQAVNRRWPD-ALIQFEDFAQKNAMPLLERYKDQYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 97/201 (48.26%), Postives = 146/201 (72.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +++ +  +++ NE LF++LL +++EE+LP++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN  LL D  Y+G R  R +G +Y E +D F+ A+K+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   71 RHIFLRSIQDNNETLFFRLLEEHLEEMLPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPDLLNDPMYMGWRHERVSGAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQ 270          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 101/205 (49.27%), Postives = 144/205 (70.24%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S   K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL++S   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGTNN Q L D  Y+G R  R TG +Y   ++EF+ AV++ + +  LIQFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   66 SDMDKHIYLRNIQDTNETLFYRLVQNHITEMMPIIYTPTVGAACENFSNIYRRGRGLFVSYANRDRIDDILNNASNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNPQRLADPMYMGWRHPRITGADYDAFVEEFIQAVQRRWPD-ALIQFEDFAQKNAMPLLERYKNRICCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.270e-54
Identity = 102/205 (49.76%), Postives = 144/205 (70.24%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S   K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGTNN Q L D  Y+G R  R TG +Y   ++EF+ AV++ + +  LIQFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   66 SDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNPQRLADPMYMGWRHPRITGPDYDAFVEEFIQAVQRRWPD-ALIQFEDFAQKNAMPLLERYKDRICCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.270e-54
Identity = 98/201 (48.76%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G R +R  G+EY E ++ FM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDD+Q
Sbjct:   70 KHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFISYPNKDRIDDLLNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPNLLEDPMYMGWRHQRIGGEEYTEFVEAFMQAVHRRWPD-ALIQFEDFAQKNAMPLLERYKDQYCCFNDDVQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.270e-54
Identity = 99/201 (49.25%), Postives = 144/201 (71.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G R  R  G+EY E ++ FM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGWRNPRIGGEEYTEFVEAFMQAVHRRWPD-ALIQFEDFAQKNAMPLLERYKDQYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.270e-54
Identity = 101/201 (50.25%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  + + NE LF+KL+ +N+ E++P++YTPTVG+AC+++  I+R  +GL+IS +++  I ++L+N  +  ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN++LL D  Y+G R +R     Y E L+ F+SAVK+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   70 KHIYLRAIHDNNETLFFKLVQNNLAEMMPIIYTPTVGDACEQFSDIYRSSRGLFISYEDRFNIDDMLRNATKNKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAHTLPVMLDVGTNNQKLLDDPMYMGARHKRIDQDSYDEFLELFISAVKRRW-PNVLLQFEDFAQPNAMPLLQRYKDRICCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.080e-53
Identity = 96/201 (47.76%), Postives = 146/201 (72.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN  LL D  Y+G R  R +G +Y E +D F+ A+K+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   71 RHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPDLLNDPMYMGWRHERVSGAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQ 270          
The following BLAST results are available for this feature:
BLAST of FC930352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_PSE144.848e-5449.76NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_VIBVU6.332e-5449.27NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO1_SHEWM6.332e-5448.76NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO1_PSEA76.332e-5448.26NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO11_VIBVY6.332e-5449.27NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO1_VIBPA8.270e-5449.76NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_SHESH8.270e-5448.76NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_SHEPW8.270e-5449.25NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAO1_COLP38.270e-5450.25NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAO1_PSEAE1.080e-5347.76NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionC34006F02EF PostHarvC1 Citrus clementina cDNA clone C34006F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930352 ID=FC930352; Name=FC930352; organism=Citrus clementina; type=EST; length=711bp
AGAAATATGAAGTTCCGCTGCAAAATATGTGGCCATGATGGAACTTGAGG
AGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAA
CTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATA
TGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGA
AGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAG
GTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGG
CTGTCAGGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCAC
TTGGAGGCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGT
ACAAACAATGAGCAATTGTTGAAGGATGAATTCTACATTGGTCTACGACA
GAGGAGGGCAACCGGACAGGAATATGCTGAACTTCTAGATGAATTCATGA
GTGCTGTCAAGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGAT
TTCGCAAACCACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCA
TCTTGTCTTCAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTG
GGGTAGTTGCAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGA
TTTTTGTTTCT
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