FC930352

Overview
NameFC930352
Unique NameFC930352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig82 contig Ccv1_Contig82:508..1218. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.080e-53
Identity = 96/201 (47.76%), Postives = 146/201 (72.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN  LL D  Y+G R  R +G +Y E +D F+ A+K+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   71 RHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPDLLNDPMYMGWRHERVSGAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQ 270          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.080e-53
Identity = 96/201 (47.76%), Postives = 146/201 (72.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN  LL D  Y+G R  R +G +Y E +D F+ A+K+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   71 RHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPDLLNDPMYMGWRHERVSGAQYEEFVDLFIQAIKRRW-PNVLLQFEDFAQTNAMPLLERYKDELCCFNDDIQ 270          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.842e-53
Identity = 101/205 (49.27%), Postives = 144/205 (70.24%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S   K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGTNN Q L D  Y+G R  R TG +Y   ++EF+ AV++ + +  LIQFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   66 SDMDKHIYLRNIQDTNETLYYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNPQRLADPMYMGWRHPRITGPDYDAFVEEFIQAVQRRWPD-ALIQFEDFAQKNAMPLLERYKDRICCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.847e-45
Identity = 95/201 (47.26%), Postives = 129/201 (64.18%), Query Frame = 2
Query:   29 VAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            V + +L  RNE LFYKLL +++ E+LPVVYTPTVGEA Q+Y   +RRPQG+Y+S+     I +  +N    +  I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI PS  +P+ +DVGTNNE+LL D  YIG +  R  G+ Y   +D ++ A  + +  K L+ +ED  N NA  ++ KY    L FNDDIQ
Sbjct:   93 VYLSDLANRNEVLFYKLLKNHLREMLPVVYTPTVGEAIQEYSHEYRRPQGIYLSIDNIDGIEKAFENLHATAGDIDLIVATDSESILGIGDWGVGGINIAIGKLAVYTAAAGIDPSRVIPVVLDVGTNNEKLLNDPLYIGNKHERVQGERYEAFIDAYVKAALK-FFPKALLHWEDLGNKNARNIMKKYNHEILTFNDDIQ 292          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 5.940e-44
Identity = 92/198 (46.46%), Postives = 132/198 (66.67%), Query Frame = 2
Query:   41 ELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNW---PERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +L  R+E L++K+L D++ EL+PVVYTPTVGEA Q++   +R  +GL++S+ E  +I E        PE  + +IV TD E ILG+GD G  G+ I VGKLALYTA GG+ P  CL +++DVGT+NEQLL D FY+G R  R  G+EY E +  ++   ++ +  + ++ FEDF   NA ++L  YGT + VFNDD+Q
Sbjct:   71 QLHYRHEVLYFKVLADHLPELMPVVYTPTVGEAIQRFSDEYRGQRGLFLSIDEPDEIEEAFNTLGLGPE-DVDLIVCTDAEAILGIGDWGVGGIQIAVGKLALYTAGGGVDPRRCLAVSLDVGTDNEQLLADPFYLGNRHARRRGREYDEFVSRYIETAQRLF-PRAILHFEDFGPANARKILDTYGTDYCVFNDDMQ 266          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 88/204 (43.14%), Postives = 130/204 (63.73%), Query Frame = 2
Query:   20 AKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +K V +  L +RNE LFY+LL D++ E+LP+VYTPTVG A Q+Y   +R+P+GLY+S+ +   + E  K + ++S  I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI PS  L + +D GTN E LL D  Y+G +  R  G+ Y + +D++++  ++ +    L+ +EDF   NA  +L +Y      FNDDIQ
Sbjct:   73 SKNVYLTALHDRNETLFYRLLNDHLGEMLPIVYTPTVGTAIQRYSHEYRKPRGLYLSIDDPDGMKEAFKQYKDQSDTIDLIVATDAEGILGIGDWGVGGIAISIGKLAVYTAAAGIDPSRVLAVVLDAGTNQESLLNDPLYVGNQHSRVRGERYDQFIDDYVALARETF-PNALLHWEDFGAKNARSILKRYKDKVCTFNDDIQ 275          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.729e-38
Identity = 86/203 (42.36%), Postives = 126/203 (62.07%), Query Frame = 2
Query:   20 AKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWP-ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            AK   M  L  +N+ L++ L+  +++EL+P++YTPT G+A   Y   FR+P+G+++ + E   I   L  +  ++ +  IVV+D E ILG+GD G  G+ I + KLAL T  GGI P   LP+ +DVGTNN++L +DE Y+G +  R  G++Y + L++F+ AVK+ Y   VL  FEDF   NA  LL KY      FNDDIQ
Sbjct:  155 AKNDFMTSLRVQNKVLYFALIRRHIKELVPIIYTPTEGDAIAAYSHRFRKPEGVFLDITEPDSIECRLATYGGDKDVDYIVVSDSEGILGIGDQGIGGVRIAISKLALMTLCGGIHPGRVLPVCLDVGTNNKKLARDELYMGNKFSRIRGKQYDDFLEKFIKAVKKVYPSAVL-HFEDFGVKNARRLLEKYRYELPSFNDDIQ 356          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38
Identity = 83/199 (41.71%), Postives = 117/199 (58.79%), Query Frame = 2
Query:   35 MMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQ-GLYISLKEKGKILEVLKNWP-ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +ME+   N  LFY L   ++ E  PVVY PT+ +  + Y  +F  PQ   Y+ +     I E LKN   +R I++IVVTD E ILG+GD G QG+ I VGKL +YTA  GI P++ LP+ +D GTN ++LL+D  Y+G  Q R  G +Y   +D+F+   +  +  K+ + +EDF   NA  +L  Y T    FNDDIQ
Sbjct:   63 LMEIFNTNRTLFYYLFNKHIVEFNPVVYDPTIADTIENYSHLFVDPQYAAYLDINHPENITETLKNAAGDREIRLIVVTDAEGILGIGDWGTQGVDISVGKLMIYTAAAGIDPASVLPVVIDAGTNRKELLEDHLYLGNHQERIYGDQYYSFVDQFVETAESIF-PKLYLHWEDFGRSNAATILNNYKTKIPTFNDDIQ 260          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37
Identity = 82/207 (39.61%), Postives = 120/207 (57.97%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGL-YISLKEKGKILEVLKNWPE-RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S+  K + +ME+   N  LFYKL   +V E +P+VY PT+ +  + Y  +F  PQG  ++ +     I   LKN    R I+++VV+D E ILG+GD G QG+ I VGKL +YT   GI PS  L + +D GTNNE+LLKD  Y+G +  R  G +Y + +D+F++  +  +   + + +EDF   NA  +L  Y      FNDDIQ
Sbjct:   56 SNLEKRLFLMEIFNTNHVLFYKLFSQHVVEFMPIVYDPTIADTIENYSELFVEPQGAAFLDINHPENIQSTLKNAANGRDIKLLVVSDAEGILGIGDWGVQGVDIAVGKLMVYTVAAGIDPSTVLAVVIDAGTNNEKLLKDPMYLGNKFNRVRGDKYYDFIDKFVNHAESLF-PNLYLHWEDFGRSNASNILNSYKDKIATFNDDIQ 261          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33
Identity = 78/204 (38.24%), Postives = 121/204 (59.31%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISL--KEKGKILEVLKNWPER-SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K + + +L   N+ LFY L+  ++ E++P++YTPT G+A +++  I+R P+G Y+ +   +   I + L  + +  S++ I++TD E ILG+GD G  G+ I V K  L T   G+ P+  LPI +DVGTNNE   K+  Y+GLR+ R  G++Y   LD  + A+++ + E   I FEDF   NA  +L  Y      FNDDIQ
Sbjct:   72 KNLYLSQLSVTNQTLFYALISQHLIEMIPIIYTPTEGDAIKQFSDIYRYPEGCYLDIDHNDLSYIKQQLSEFGKSDSVEYIIITDSEGILGIGDQGVGGVLISVAKGHLMTLCAGLDPNRFLPIVLDVGTNNETHRKNHQYMGLRKDRVRGEQYDSFLDNVIKAIREVFPE-AFIHFEDFGLANAKRILDHYRPDIACFNDDIQ 274          
The following BLAST results are available for this feature:
BLAST of FC930352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_PSEAB1.080e-5347.76NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA81.080e-5347.76NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_VIBHB1.842e-5349.27NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAO2_BACSU1.847e-4547.26Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAOX_MYCTU5.940e-4446.46Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MAO3_BACSU7.758e-4443.14Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAOM_YEAST3.729e-3842.36NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MLES_LACLA8.308e-3841.71Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MLES_OENOE1.851e-3739.61Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MAOX_SCHPO1.621e-3338.24NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC34006F02EF PostHarvC1 Citrus clementina cDNA clone C34006F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930352 ID=FC930352; Name=FC930352; organism=Citrus clementina; type=EST; length=711bp
AGAAATATGAAGTTCCGCTGCAAAATATGTGGCCATGATGGAACTTGAGG
AGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAA
CTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATA
TGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGA
AGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAG
GTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGG
CTGTCAGGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCAC
TTGGAGGCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGT
ACAAACAATGAGCAATTGTTGAAGGATGAATTCTACATTGGTCTACGACA
GAGGAGGGCAACCGGACAGGAATATGCTGAACTTCTAGATGAATTCATGA
GTGCTGTCAAGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGAT
TTCGCAAACCACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCA
TCTTGTCTTCAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTG
GGGTAGTTGCAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGA
TTTTTGTTTCT
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