FC930352

Overview
NameFC930352
Unique NameFC930352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_ECO45 (NAD-dependent malic enzyme OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 106/201 (52.74%), Postives = 149/201 (74.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_ECO27 (NAD-dependent malic enzyme OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 106/201 (52.74%), Postives = 149/201 (74.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 106/201 (52.74%), Postives = 149/201 (74.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.103e-57
Identity = 106/201 (52.74%), Postives = 149/201 (74.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY E +DEF+ AVKQ + + VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVQNHLDEMMPVIYTPTVGAACERFSEIYRRARGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRITDDEYYEFVDEFIQAVKQRWPD-VLLQFEDFAQKNAMPLLNRYRDEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.747e-57
Identity = 105/201 (52.24%), Postives = 149/201 (74.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+LL D++EE++P++YTPTVG+AC+K+  I+R  +GL+IS  E+ +I ++L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNNE+LL+D  Y+G R +R    EY E LD+F+ AV + +   V++QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   70 KHIYLRAIQDNNETLFYRLLTDHLEEMMPIIYTPTVGDACEKFSDIYRSSRGLFISYSERDQIDDILRNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVMLDVGTNNEKLLEDPMYMGARHKRIEQDEYDEFLDKFIKAVTRRW-PGVMLQFEDFAQPNAMPLLRRYRDEVCCFNDDIQ 269
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SALPB (NAD-dependent malic enzyme OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQ 272
[Close]
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 6.119e-57
Identity = 105/201 (52.24%), Postives = 147/201 (73.13%), Query Frame = 2 
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY   +DEF+ AVKQ + + +L+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKQRWPD-ILLQFEDFAQKNAMPLLTRYRDEICSFNDDIQ 272
The following BLAST results are available for this feature:
BLAST of FC930352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECO451.610e-5752.74NAD-dependent malic enzyme OS=Escherichia coli O45... [more]
MAO1_ECO271.610e-5752.74NAD-dependent malic enzyme OS=Escherichia coli O12... [more]
MAO1_ECO241.610e-5752.74NAD-dependent malic enzyme OS=Escherichia coli O13... [more]
MAO1_CITK82.103e-5752.74NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO1_IDILO2.747e-5752.24NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAO1_SALTY6.119e-5752.24NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI6.119e-5752.24NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV6.119e-5752.24NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]
MAO1_SALPB6.119e-5752.24NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALPA6.119e-5752.24NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]

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Properties
Property NameValue
Genbank descriptionC34006F02EF PostHarvC1 Citrus clementina cDNA clone C34006F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930352 ID=FC930352; Name=FC930352; organism=Citrus clementina; type=EST; length=711bp
AGAAATATGAAGTTCCGCTGCAAAATATGTGGCCATGATGGAACTTGAGG
AGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAA
CTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATA
TGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGA
AGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAG
GTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGG
CTGTCAGGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCAC
TTGGAGGCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGT
ACAAACAATGAGCAATTGTTGAAGGATGAATTCTACATTGGTCTACGACA
GAGGAGGGCAACCGGACAGGAATATGCTGAACTTCTAGATGAATTCATGA
GTGCTGTCAAGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGAT
TTCGCAAACCACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCA
TCTTGTCTTCAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTG
GGGTAGTTGCAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGA
TTTTTGTTTCT
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