FC930352

Overview
NameFC930352
Unique NameFC930352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig82 contig Ccv1_Contig82:508..1218. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.180e-56
Identity = 101/205 (49.27%), Postives = 145/205 (70.73%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S+  K++ +  +++ NE L+++L+  ++EE++P++YTPTVGEACQK+  I+RR +GL++S +++ ++  +L N P   ++VIV+TDGERILGLGD G  GMGIP+GKLALYTA GGI P   LPI +DVGTNN  LL D  Y+G R  R TG +Y + +D+ + A+++ +    LIQFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   63 SAMEKHIYLRNIQDTNETLYFRLINQHIEEMMPIIYTPTVGEACQKFSQIYRRNRGLFLSFEDQDELEAILNNAPNTHVKVIVITDGERILGLGDQGIGGMGIPIGKLALYTACGGISPEHTLPIVLDVGTNNSALLSDPMYMGWRHPRITGDQYDDFVDDCLKAIRRRW-PNALIQFEDFAQANAMPLLMRYQNQFCCFNDDIQ 266          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 6.765e-56
Identity = 104/201 (51.74%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LP+ +DVGTNN Q L D  Y+G R  R +GQEY   +DEF+ AVK+ + +  LIQFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVENHITEMMPIIYTPTVGAACEDFSNIYRRGRGLFISYPNRDRIEDMLNNASRQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYTLPVVLDVGTNNPQRLSDPMYMGWRHTRISGQEYDNFVDEFIQAVKRRWPD-ALIQFEDFAQKNAMPLLERYKNKICCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 8.835e-56
Identity = 105/201 (52.24%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+LL +++E ++P++YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGTNN+QLL D  Y+G R  R T  EY   +D+F+ AVKQ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLLENHLEVMMPIIYTPTVGSACERFSEIYRRARGVFISWPNRHNMDDILQNVPIHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNQQLLNDPLYMGWRHPRITDDEYYAFVDDFIQAVKQRW-PNVLLQFEDFAQKNAMPLLERYRDEICCFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.507e-55
Identity = 106/229 (46.29%), Postives = 147/229 (64.19%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLF 709
            +Y+ +  L +RNE LFY LL +N+E ++P++YTPTVGEACQK+G+ FR  QG+Y + ++KG I  ++ NWP   + +IVV+DG RILGLGDLG  GMGIPVGKL LY A  G  P+  LP+ +D GTN ++ L+D++Y+G R  R    EY  L+DEF++A   N   KV++QFED +N + F LL +Y   +L FNDDIQ                    + EHR +F
Sbjct:   61 RYIFLNCLRDRNETLFYYLLSNNLELMMPIIYTPTVGEACQKFGNEFRFAQGMYFASQDKGNIRAMMDNWPAEGVDIIVVSDGSRILGLGDLGTNGMGIPVGKLQLYVAGAGFCPTRTLPVIIDSGTNTKKYLEDKYYLGERHPRIPDSEYYPLVDEFLAAA-FNKWPKVIVQFEDISNDHCFNLLDEYRNKYLCFNDDIQGTGSVILSGFINAVRSVQKPIKEHRMVF 288          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SODGM (NAD-dependent malic enzyme OS=Sodalis glossinidius (strain morsitans) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.968e-55
Identity = 102/201 (50.75%), Postives = 148/201 (73.63%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            +++ +  +++ NE LFY+LL  ++ E+LP++YTPTVG+AC+++  I+RR +G++IS     KI ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +D GTNN+QLL D  Y+G R  R TG++Y + +D F+ AVK+ +   VL+QFEDFA  NA  LL +Y +    FNDDIQ
Sbjct:   73 RHIYLRNIQDTNETLFYRLLAAHLAEMLPIIYTPTVGDACERFSDIYRRARGVFISYNNCDKIEDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDAGTNNQQLLNDPLYMGWRHPRITGEQYDKFVDAFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRSELCCFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.968e-55
Identity = 103/205 (50.24%), Postives = 149/205 (72.68%), Query Frame = 2
Query:   11 SSAAKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            S+  +++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+I+   + +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN Q L D  Y+G R  R TG EY   ++EF+ AVK+ + + VL+QFEDFA  NA  LL++Y      FNDDIQ
Sbjct:   69 SATEQHIYLRNIQDTNETLFYRLLRSHLSEMMPIIYTPTVGEACEHFSYIYRRARGLFIAYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRITGDEYNAFVEEFIQAVKRRWPD-VLLQFEDFAQKNAMPLLSRYRDRLCCFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55
Identity = 102/201 (50.75%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKDRYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPC (NAD-dependent malic enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55
Identity = 102/201 (50.75%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKDRYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55
Identity = 102/201 (50.75%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKDRYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55
Identity = 102/201 (50.75%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKDRYCCFNDDIQ 269          
The following BLAST results are available for this feature:
BLAST of FC930352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO12_VIBVY5.180e-5649.27NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MAO11_PHOPR6.765e-5651.74NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_ENTS88.835e-5652.24NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAOX_DICDI1.507e-5546.29NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAO1_SODGM1.968e-5550.75NAD-dependent malic enzyme OS=Sodalis glossinidius... [more]
MAO1_EDWI91.968e-5550.24NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]
MAO1_SHESW2.571e-5550.75NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEPC2.571e-5550.75NAD-dependent malic enzyme OS=Shewanella putrefaci... [more]
MAO1_SHEB92.571e-5550.75NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB82.571e-5550.75NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

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Properties
Property NameValue
Genbank descriptionC34006F02EF PostHarvC1 Citrus clementina cDNA clone C34006F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930352 ID=FC930352; Name=FC930352; organism=Citrus clementina; type=EST; length=711bp
AGAAATATGAAGTTCCGCTGCAAAATATGTGGCCATGATGGAACTTGAGG
AGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAA
CTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATA
TGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGA
AGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAG
GTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGG
CTGTCAGGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCAC
TTGGAGGCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGT
ACAAACAATGAGCAATTGTTGAAGGATGAATTCTACATTGGTCTACGACA
GAGGAGGGCAACCGGACAGGAATATGCTGAACTTCTAGATGAATTCATGA
GTGCTGTCAAGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGAT
TTCGCAAACCACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCA
TCTTGTCTTCAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTG
GGGTAGTTGCAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGA
TTTTTGTTTCT
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