FC930352

Overview
NameFC930352
Unique NameFC930352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB5 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55
Identity = 102/201 (50.75%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKDRYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55
Identity = 102/201 (50.75%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKDRYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.571e-55
Identity = 106/201 (52.74%), Postives = 144/201 (71.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN Q L D  Y+G R  R T  EY E +DEF+ AVK+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHVYLRNIQDTNETLFYRLLDGHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRAHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRITDDEYYEFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDEICSFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SERP5 (NAD-dependent malic enzyme OS=Serratia proteamaculans (strain 568) GN=sfcA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.385e-55
Identity = 103/201 (51.24%), Postives = 146/201 (72.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   + +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN Q L D  Y+G R  R +G EY   ++EF+ AVK+ +   VL+QFEDFA +NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLLDSHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYHAFVEEFIQAVKRRW-PNVLLQFEDFAQNNATPLLNRYRDEICCFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.385e-55
Identity = 101/201 (50.25%), Postives = 146/201 (72.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +++VIVVTDGERILGLGD G  GMGIP+GKL+LYT  GGI P+  LPI +DVGTNN+QLL D  Y+G R  R T  EY + +D+ + A+K  + + VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLIGNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYQNRHNLDDILQNVPNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTTCGGISPAYTLPIVLDVGTNNQQLLDDPLYMGWRHPRITDDEYYQFVDDVIQAIKARWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.385e-55
Identity = 101/201 (50.25%), Postives = 146/201 (72.64%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +++VIVVTDGERILGLGD G  GMGIP+GKL+LYT  GGI P+  LPI +DVGTNN+QLL D  Y+G R  R T  EY + +D+ + A+K  + + VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLIGNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYQNRHNLDDILQNVPNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTTCGGISPAYTLPIVLDVGTNNQQLLDDPLYMGWRHPRITDDEYYQFVDDVIQAIKARWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.385e-55
Identity = 106/201 (52.74%), Postives = 143/201 (71.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LP+ +DVGTNN Q L D  Y+G R  R T  EY   +DEF+ AVK+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ
Sbjct:   73 KHVYLRNIQDTNETLFYRLLDGHLNEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRANIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRITDDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRDEICSFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.727e-55
Identity = 101/201 (50.25%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N     +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G R  R  G+EY+E ++ FM AV + + + VLIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNNIAEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRHKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGWRHPRIGGEEYSEFIEAFMEAVHRRWPD-VLIQFEDFAQKNAMPILERYKDRYCCFNDDIQ 269          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_YERE8 (NAD-dependent malic enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=sfcA PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.480e-55
Identity = 104/201 (51.74%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN Q L D  Y+G R  R +G EY   +DEF+ AVK+ +   VL+QFEDFA +NA  LL +Y      FNDDIQ
Sbjct:   73 KHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRISGDEYYAFVDEFIQAVKRRW-PNVLLQFEDFAQNNATPLLNRYRDELCCFNDDIQ 272          
BLAST of FC930352 vs. ExPASy Swiss-Prot
Match: MAO1_SHESR (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.769e-55
Identity = 101/201 (50.25%), Postives = 145/201 (72.14%), Query Frame = 2
Query:   23 KYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQ 625
            K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ
Sbjct:   70 KHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKERYCCFNDDIQ 269          
The following BLAST results are available for this feature:
BLAST of FC930352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEB52.571e-5550.75NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB22.571e-5550.75NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_PECCP2.571e-5552.74NAD-dependent malic enzyme OS=Pectobacterium carot... [more]
MAO1_SERP54.385e-5551.24NAD-dependent malic enzyme OS=Serratia proteamacul... [more]
MAO1_KLEP74.385e-5550.25NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_KLEP34.385e-5550.25NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_ERWCT4.385e-5552.74NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAO1_SHEAM5.727e-5550.25NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO1_YERE87.480e-5551.74NAD-dependent malic enzyme OS=Yersinia enterocolit... [more]
MAO1_SHESR9.769e-5550.25NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC34006F02EF PostHarvC1 Citrus clementina cDNA clone C34006F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930352 ID=FC930352; Name=FC930352; organism=Citrus clementina; type=EST; length=711bp
AGAAATATGAAGTTCCGCTGCAAAATATGTGGCCATGATGGAACTTGAGG
AGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAA
CTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATA
TGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGA
AGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAG
GTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGG
CTGTCAGGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCAC
TTGGAGGCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGT
ACAAACAATGAGCAATTGTTGAAGGATGAATTCTACATTGGTCTACGACA
GAGGAGGGCAACCGGACAGGAATATGCTGAACTTCTAGATGAATTCATGA
GTGCTGTCAAGCAAAATTATGGAGAAAAAGTTCTTATACAGTTTGAGGAT
TTCGCAAACCACAATGCTTTTGAGTTGCTTGCAAAATATGGCACAACTCA
TCTTGTCTTCAATGATGATATACAGGGTACAGCGTCTGTTGTTCTTGCTG
GGGTAGTTGCAGCACTGAAGTTGATTGGTGGCACACTGGCCGAGCATAGA
TTTTTGTTTCT
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