FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.201e-40 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQR YDQ+VHDV +QKLPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA +DEAEL HMVAT IDDRPS R+PRG G G Sbjct: 382 LATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRG 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris GN=dxs PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.201e-40 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQR YDQ+VHDV +QKLPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA +DEAEL HMVAT IDDRPS R+PRG G G Sbjct: 382 LATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRG 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_PHEZH (1-deoxy-D-xylulose-5-phosphate synthase OS=Phenylobacterium zucineum (strain HLK1) GN=dxs PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.201e-40 Identity = 76/104 (73.08%), Postives = 88/104 (84.62%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA++G+KPF AIYS+FLQRGYDQVVHDV +Q LPVRFA+DRAGLVGADGPTH G+FD+ FM LP MVVM P+DEAEL +ATA IDDRPS FR+PRG G+G Sbjct: 379 LAADGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDVGFMGQLPGMVVMGPADEAELARAIATAVAIDDRPSAFRYPRGEGVG 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_NITWN (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.201e-40 Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD F+ CLPNMV+MA +DEAEL HMVAT I+DRPS R+PRG G G Sbjct: 406 LATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADEAELVHMVATQVAINDRPSAVRYPRGEGRG 509
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_GLUOX (1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans GN=dxs PE=3 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 1.569e-40 Identity = 77/104 (74.04%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 +ASEG++PFCAIYS+FLQR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH GAFD+ ++ CLPNMVVMAPSDE EL H ATA D P FR+PRGNGIG Sbjct: 398 IASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATACEYDAGPIAFRYPRGNGIG 501
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.677e-40 Identity = 76/104 (73.08%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCA+YS+FLQR YDQVVHDV LQ LPVRF +DRAGLVGADG TH GAFDI F++CLP M VMAP+DEAEL HM+AT DD PS RFPRG G+G Sbjct: 380 LAAEGFKPFCALYSTFLQRAYDQVVHDVALQGLPVRFIIDRAGLVGADGATHAGAFDIAFLACLPGMTVMAPADEAELVHMMATMVAFDDGPSAVRFPRGEGVG 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=dxs PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.677e-40 Identity = 77/104 (74.04%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA SDEAEL HMVAT I+DRPS R+PRG G G Sbjct: 379 LATEGYKPFCAIYSTFLQRAYDQVVHDVALQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPSALRYPRGEGRG 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRASB (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.677e-40 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD ++ CLPNMV+MA SDEAEL HMVAT I+DRPS R+PRG G G Sbjct: 382 LAAEGFKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAINDRPSSVRYPRGEGRG 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BEII9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dxs PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.566e-40 Identity = 74/107 (69.16%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA+EG +PFCA+YS+FLQRGYDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD++++ LPNMV+MA +DEAEL HMVATAA D+ P FR+PRG G+G L Sbjct: 382 LATEGYRPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVSYLGILPNMVIMAAADEAELVHMVATAAAYDEGPIAFRYPRGEGVGIEL 488
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=dxs PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.963e-40 Identity = 75/104 (72.12%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD ++ CLPN V+MA SDEAEL HMVAT I+DRPS R+PRG G G Sbjct: 379 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRG 482 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |