FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ANASK (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter sp. (strain K) GN=dxs PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.683e-32 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P AIYS+FLQR YDQ++HDV LQKLPV FA+DR GLVGADG TH GAFD+ ++ C+P +VVMAPSDE EL HM+ T ++ + P+ R+PRG G G L Sbjct: 378 LACEGIRPVVAIYSTFLQRAYDQIIHDVALQKLPVTFALDRGGLVGADGKTHQGAFDLAYLRCVPGLVVMAPSDENELRHMLHT-SLQHEGPAALRYPRGAGEGVAL 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.683e-32 Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA E VKP AIYS+FLQRGYDQ+VHDV LQ LPV FA+DRAGLVGADGPTH G+FD++++ C+PNM + APSDEAE +++T D P R+PRG+G GA L Sbjct: 380 LACESVKPVLAIYSTFLQRGYDQLVHDVALQNLPVLFAVDRAGLVGADGPTHHGSFDLSYLRCVPNMTIAAPSDEAECWRLLST-GYHHDGPFAVRYPRGSGPGAAL 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS1_GEOMG (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxs1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.683e-32 Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA+EG +P A+YSSFLQR YDQV HDV LQ LPV FA+DRAG+VG+DGPTH G FD+ ++ LPNMVVMAP DE EL H++ T A+ D P+ R+PRGNG G L Sbjct: 378 LAAEGYRPVFAVYSSFLQRAYDQVFHDVCLQNLPVTFAIDRAGVVGSDGPTHHGLFDLAYLRHLPNMVVMAPKDENELQHLLLT-AIEHDGPAAVRYPRGNGYGVSL 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SYNAS (1-deoxy-D-xylulose-5-phosphate synthase OS=Syntrophus aciditrophicus (strain SB) GN=dxs PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.504e-32 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA+EG+ P AIYSSFLQR YDQ++HDV LQ LPV FA+DRAG VG DGPTH G FD++++ +PNMVVMAP DE EL HM+ T AV +P+ R+PRG+G+G + Sbjct: 393 LATEGILPVVAIYSSFLQRAYDQILHDVCLQNLPVVFALDRAGFVGEDGPTHHGLFDLSYLRSIPNMVVMAPKDENELQHMLHT-AVACGKPAAVRYPRGSGVGVTM 498
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHESH (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=dxs PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.504e-32 Identity = 64/103 (62.14%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 A EG+KP AIYS+FLQRGYDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T + P+ R+PRG+ G Sbjct: 381 ACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSFMRTVPNMVIMAPSDENECRQMLYTGYCYREGPTAVRYPRGSATG 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ANADE (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=dxs PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.504e-32 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P AIYS+FLQR YDQ++HDV LQKLPV FA+DR GLVGADG TH GAFD+ ++ C+P +V+MAPSDE EL HM+ T ++ D P+ R+PRG G G L Sbjct: 378 LACEGIRPVVAIYSTFLQRAYDQIIHDVALQKLPVTFALDRGGLVGADGKTHQGAFDLAYLRCVPGLVLMAPSDENELRHMLHT-SLQHDGPAALRYPRGAGEGVPL 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_THIDA (1-deoxy-D-xylulose-5-phosphate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dxs PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.576e-32 Identity = 63/107 (58.88%), Postives = 83/107 (77.57%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EGVKP AIYS+FLQR YDQ++HD+ LQ LPV A+DRAGLVGADGPTH G+FD++F+ C+P++V+ APSDE E +++T A + D P+ R+PRG G GA + Sbjct: 374 LACEGVKPVVAIYSTFLQRAYDQLIHDIALQNLPVTLAIDRAGLVGADGPTHAGSFDLSFLRCVPDLVIAAPSDENECRRLLST-AFLHDGPAAVRYPRGCGTGAAI 479
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MICAN (1-deoxy-D-xylulose-5-phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=dxs PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.576e-32 Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P IYS+FLQR +DQ++HD+ +Q LPV F MDRAG+VGADGPTH G +DI ++ C+PNM +MAP DEAEL MV T P R+PRGNG+G L Sbjct: 380 LACEGMRPVVTIYSTFLQRAFDQIIHDICIQNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPIAMRYPRGNGLGVPL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SYNJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxs PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.977e-32 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 +A EG++P AIYS+FLQR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +DI ++ C+P MV+MAP DEAEL MV T P R+PRG G+G L Sbjct: 385 MACEGMRPVVAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTKGPIAMRYPRGAGVGVPL 491
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHISS (1-deoxy-D-xylulose-5-phosphate synthase OS=Shigella sonnei (strain Ss046) GN=dxs PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.977e-32 Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++++ C+P MV+M PSDE E M+ T +D PS R+PRGN +G L Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVEL 486 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |