FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.963e-40 Identity = 75/104 (72.12%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD ++ CLPN V+MA SDEAEL HMVAT I+DRPS R+PRG G G Sbjct: 408 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRG 511
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.017e-39 Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA++G +PFCAIYS+FLQR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FDIT+++ LPNMVVMA +DEAEL HMV TAAV D P R+PRGNG+G L Sbjct: 381 LAAQGYRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAAVHDSGPIALRYPRGNGVGVAL 487
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_HYPNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=dxs PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.017e-39 Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA++G+KPFCAIYS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDI ++ LP V MAPSDEAEL MV T+ IDDRPS R+PRG G+G V+ Sbjct: 379 LAADGMKPFCAIYSTFLQRGYDQVVHDVAIQQLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGFVCMAPSDEAELARMVLTSLEIDDRPSAVRYPRGEGVGVVI 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUO2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |