FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain 2308) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG KPFCAIYS+FLQRGYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD F++ LP VVMA SDEAEL HMV TAA D+ P FR+PRG+G+G L Sbjct: 380 LASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.328e-39 Identity = 75/104 (72.12%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG +PFCA+YS+FLQRGYDQVVHDV LQ LPVRFA+DRAGLVGADG TH GAFD+ ++CLP VMAP+DEAELTHM+ATA D P FRFPRG G+G Sbjct: 380 LAAEGYRPFCALYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDLAMLTCLPGFTVMAPADEAELTHMIATAVGHDAGPIAFRFPRGEGVG 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.735e-39 Identity = 76/104 (73.08%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPF AIYS+FLQR YDQVVHDV +QKLPVRF +DRAG VGADG THCGAFD TF++ LP VVMA +DEAEL HMV TAA DD P FR+PRGNG+G Sbjct: 381 LATEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFLASLPGFVVMAAADEAELRHMVRTAAAYDDGPIAFRYPRGNGVG 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.266e-39 Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+ G+KPFCA+YS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDI +++ LP MVVMA +DEAEL HMVATAA DD P FR+PRG G+G Sbjct: 385 LAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVG 488
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.959e-39 Identity = 74/104 (71.15%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG KPFCAIYS+FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD ++ CLPN V+MA SDEAEL HMVAT I+D PS R+PRG G G Sbjct: 382 LATEGFKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDAPSAVRYPRGEGRG 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.959e-39 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 +A+ G+KPFCAIYSSFLQRGYDQ+VHDV LQ LPVRF +DRAGLVGADGPTH GAFDI ++S LPNM VMA +DEAEL HM+ATAA +D P R+PRG G G L Sbjct: 380 MAAGGLKPFCAIYSSFLQRGYDQIVHDVALQSLPVRFMIDRAGLVGADGPTHAGAFDIGYLSALPNMTVMACADEAELVHMMATAAAHNDGPIALRYPRGEGTGVAL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.959e-39 Identity = 74/104 (71.15%), Postives = 84/104 (80.77%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA G+KPFCAIYSSFLQRGYDQ+ HDV LQ LPVRF +DRAGLVGADG TH GAFD+ F++ LPNM VMA +DEAEL HM+ATA D+ P FRFPRG G+G Sbjct: 384 LAGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFITSLPNMTVMAAADEAELIHMIATAVAFDEGPIAFRFPRGEGVG 487
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 5.048e-39 Identity = 73/107 (68.22%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA+EG++PFCAIYS+FLQR +DQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD+T+++ LPN+VVMA +DEAEL HM TAA+ D P FR+PRGNG+G L Sbjct: 381 LAAEGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNLVVMAAADEAELVHMTYTAALHDSGPIAFRYPRGNGVGVPL 487 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |