FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MARMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain MCS10) GN=dxs PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 5.048e-39 Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA++G+KPF AIYS+FLQRGYDQVVHDV +QKLPVRFA+DRAGLVGADG TH G+FDI ++ LP MV+MA +DE EL+ MV TAA+IDD PS FR+PRGNG G Sbjct: 379 LAADGMKPFAAIYSTFLQRGYDQVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVLMAAADELELSRMVKTAALIDDGPSAFRYPRGNGTG 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 5.048e-39 Identity = 73/104 (70.19%), Postives = 90/104 (86.54%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+ G++PFCAIYS+FLQRGYDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH G+FD+ F+S LP +VVMA +DEAEL HMVATAA D+ P FR+PRG+G+G Sbjct: 381 LAAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVG 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.125e-38 Identity = 75/107 (70.09%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 +A+ G+KPFCAIYS+FLQRGYDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FDI ++ LP MVVMA +DEAEL HMVATA +D P FR+PRGNG G L Sbjct: 383 MAATGLKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHNDGPIAFRYPRGNGTGVPL 489
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.469e-38 Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+ G+KPFCA+YS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDI FM+ LP MVVMA +DEAEL HMVATAA D P FR+PRG G G Sbjct: 385 LAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPGMVVMAAADEAELKHMVATAAAYDAGPIAFRYPRGEGEG 488
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.469e-38 Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA++G KPFCA+YS+FLQRGYDQ+VHDV +Q LPVRF +DRAG VGADGPTH G+FD TF++ LP MVVMA +DEAEL HMV TAA D+ P FR+PRG G+G Sbjct: 381 LAADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVG 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.505e-38 Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+EG+KPFCAIYS+FLQR YDQVVHDV +Q LPVRFA+DRAGLVG+DG TH G+FD+ ++ C+PN+V+MA +DEAEL HMVATAA D P R+PRG G+G Sbjct: 382 LAAEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGSDGCTHAGSFDVAYLGCVPNIVIMAAADEAELKHMVATAAAYDHGPIAVRYPRGEGVG 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.505e-38 Identity = 74/104 (71.15%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 +A+ G+KPF AIYS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G++DI++++ LP VVMA +DEAEL HMV TA IDDRPS FRFPRG G+G Sbjct: 383 MAAGGLKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGCTHAGSYDISYLANLPGFVVMAAADEAELRHMVRTALEIDDRPSAFRFPRGEGMG 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.581e-38 Identity = 74/107 (69.16%), Postives = 86/107 (80.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA+EG +PF AIYS+FLQR YDQVVHDV +Q LPVRFA+DRAG VGADG THCGAFD+ +++ LPNMVVMA +DEAEL HMV TAA D+ P FR+PRG G G L Sbjct: 394 LATEGYRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGFVGADGATHCGAFDVAYLATLPNMVVMAAADEAELKHMVRTAADHDEGPIAFRYPRGEGTGVPL 500
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BARBK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.581e-38 Identity = 73/104 (70.19%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 +A EG KPF AIYS+FLQR YDQ++HDV +QKLPVRFA+DRAG VGADG TH G+FDI F++ LP VVMAPSDE EL HMV TAAV D P FR+PRG GIG Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAVYDQGPISFRYPRGEGIG 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 7.289e-38 Identity = 74/104 (71.15%), Postives = 86/104 (82.69%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA+ G+KPFCA+YS+FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDI +++ LP VVMA +DEAEL HMVATA DD P FRFPRG G G Sbjct: 385 LAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELKHMVATAVAHDDGPIAFRFPRGEGNG 488 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |