FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_THETN (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermoanaerobacter tengcongensis GN=dxs PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.789e-27 Identity = 57/100 (57.00%), Postives = 73/100 (73.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRG 300 LA EG KP+ A+YS+FLQR YDQV+HDV +QKLPV FA+DRAG+VG DG TH G FDI+F+ +PN+ +M+P D EL MV + + D P R+PRG Sbjct: 373 LAVEGYKPYFAVYSTFLQRAYDQVIHDVCIQKLPVVFAVDRAGIVGEDGETHQGVFDISFLRAIPNIAIMSPKDANELVEMVKLSRNL-DFPVAIRYPRG 471
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BUCAI (1-deoxy-D-xylulose-5-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dxs PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.789e-27 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA G KP +IYS+F QR YDQ++HD+ LQKL V FA+DRAG+VG DG TH G FD+ ++ C+P +V+M PS+E E M+ T + + PS R+P+G G+G +L Sbjct: 367 LAISGYKPVVSIYSTFFQRAYDQLIHDIALQKLSVLFAVDRAGIVGNDGQTHQGVFDLAYLRCIPGIVIMTPSNENECRQMLYTGYMHNKGPSVVRYPKGYGVGELL 473
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SYMTH (1-deoxy-D-xylulose-5-phosphate synthase OS=Symbiobacterium thermophilum GN=dxs PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.561e-27 Identity = 60/107 (56.07%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA G++P A+YS+FLQR YDQV+HDV LQ LPV A+DR GLV DG TH G FD+ ++ +PNMVVMAP DE EL HM+ T A+ D P+ R+PRG G L Sbjct: 373 LAKGGMRPVFAVYSTFLQRAYDQVIHDVALQNLPVTLAIDRGGLV-EDGATHQGVFDVAYLRAIPNMVVMAPKDENELQHMLYT-ALCHDGPAALRYPRGKAQGVPL 477
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_BACV8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=dxs PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.561e-27 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNG 306 +A +G+ PFC IYSSF+QR YD V+HD+ +QKL V +DRAGLVG DGPTH GAFD+ +M +PN++V +P +E EL ++ TA + D P R+PRG G Sbjct: 387 MAKDGLLPFCNIYSSFMQRAYDNVIHDIAIQKLNVVLCLDRAGLVGEDGPTHHGAFDLAYMRPIPNLIVASPYNEHELRCLMYTAQLPDKGPFVIRYPRGRG 488
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SULDN (1-deoxy-D-xylulose-5-phosphate synthase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=dxs PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.874e-27 Identity = 57/101 (56.44%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA EG KPFC IYS+FLQRGYDQV+HD L LPV FA+DRAG+VG DG TH G FD++F+ +PNM + AP DE +A AA P R+PRG+ Sbjct: 364 LAKEGFKPFCTIYSTFLQRGYDQVIHDTCLMNLPVVFALDRAGIVGEDGETHQGVFDVSFLRAIPNMTLFAPRDEKSFHQAMAFAAQY-QFPCSLRYPRGS 463
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_DICT6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dxs PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 54/104 (51.92%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 LA G+KP AIYS+FLQR +DQ++HDV LQKLP+ F +DRAG+V DGPTH G FD++++ +PNMV+ AP DE+EL ++ T A+ P R+P+ G+G Sbjct: 369 LAKNGLKPVVAIYSTFLQRAFDQIIHDVCLQKLPIVFVLDRAGIVSDDGPTHQGIFDLSYLRLIPNMVISAPKDESELRDLLYT-AINYPGPFAIRYPKSKGVG 471
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ALCBS (1-deoxy-D-xylulose-5-phosphate synthase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dxs PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.684e-26 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA E KP AIYS+FLQRGYDQ++HDV LQ+L V F +DRAGLVG DG TH G FD+ ++ +PNM++ APSDE E ++ +A + P+ R+PRG G GA + Sbjct: 394 LACENQKPVVAIYSTFLQRGYDQLIHDVALQELDVTFGLDRAGLVGEDGATHGGVFDLAYLRTVPNMIIAAPSDENECRQLL-YSAYQHEGPAAVRYPRGTGPGATI 499
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_PORGI (1-deoxy-D-xylulose-5-phosphate synthase OS=Porphyromonas gingivalis GN=dxs PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.873e-26 Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGI 309 LA EG+ PFC IYSSF+QRGYDQV+HDV L V +DRAGLVG DG TH G FD+ F+ C+P++VV +P +E EL +++ TA D P R+PRG G+ Sbjct: 386 LAKEGLIPFCNIYSSFIQRGYDQVIHDVALSGSHVVICLDRAGLVGEDGATHHGVFDMAFLRCVPDIVVASPLNEHELRNLMLTAYKGYDGPMVIRYPRGKGV 488
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_PORG3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dxs PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.873e-26 Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGI 309 LA EG+ PFC IYSSF+QRGYDQV+HDV L V +DRAGLVG DG TH G FD+ F+ C+P++VV +P +E EL +++ TA D P R+PRG G+ Sbjct: 386 LAKEGLIPFCNIYSSFIQRGYDQVIHDVALSGSHVVICLDRAGLVGEDGATHHGVFDMAFLRCVPDIVVASPLNEHELRNLMLTAYKGYDGPMVIRYPRGKGV 488
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_NITSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitratiruptor sp. (strain SB155-2) GN=dxs PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.873e-26 Identity = 58/103 (56.31%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGI 309 LA EG KPF AIYS+FLQRGYDQV+HD+ L + V FA+DRAG+VG DG TH GAFD++++ +PNM + AP D L + V A DRP FR+PRG+ I Sbjct: 362 LAKEGFKPFVAIYSTFLQRGYDQVIHDIALMDVGVAFAIDRAGIVGEDGETHQGAFDVSYLRPIPNMHLFAPRDPKTLEYAVEFAKDF-DRPCAFRYPRGSFI 463 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |