FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_PARD8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=dxs PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.418e-25 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNG 306 LA EG+ PFC +YSSF+QR YD V+HDV LQKL + +DRAGLVG DG TH G FD+ ++ +PN+V+ +P +E +L +++ T D P R+PRG G Sbjct: 387 LAKEGMIPFCNVYSSFMQRAYDMVIHDVALQKLHMVICLDRAGLVGEDGATHHGVFDLAYLRPIPNLVIASPLNELDLRNLMYTGYAAFDGPFVIRYPRGKG 488
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_HELPY (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori GN=dxs PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.418e-25 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGS 470
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_HELPH (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain HPAG1) GN=dxs PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.418e-25 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGS 470
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_HELPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori (strain G27) GN=dxs PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.418e-25 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVRFANEHDSSPCAFRYPRGS 470
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_HELPJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Helicobacter pylori J99 GN=dxs PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.076e-25 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 +A EG KPF +IYS+FLQR YD +VHD + LP++ A+DRAG+VG DG TH G D++++ +PNMV+ AP D L + V A D P FR+PRG+ Sbjct: 370 MAKEGFKPFVSIYSTFLQRAYDSIVHDACISSLPIKLAIDRAGIVGEDGETHQGLLDVSYLRSIPNMVIFAPRDNETLKNAVYFANEHDSSPCAFRYPRGS 470
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_DESHY (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain Y51) GN=dxs PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.076e-25 Identity = 58/107 (54.21%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA G+KP +IYS+F QR YDQV+HDV L V A+DRAG+VG DGPTH G FDI+F+ +PN+V MAP DE EL HM+ T+ +D P R+PR G G L Sbjct: 376 LAFGGMKPVVSIYSTFYQRAYDQVLHDVCLPHANVVMAIDRAGVVGDDGPTHHGVFDISFLRVIPNLVFMAPKDENELRHMLYTSLQLDG-PVALRYPRSVGQGVEL 481
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_DESHD (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dxs PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.076e-25 Identity = 58/107 (54.21%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA G+KP +IYS+F QR YDQV+HDV L V A+DRAG+VG DGPTH G FDI+F+ +PN+V MAP DE EL HM+ T+ +D P R+PR G G L Sbjct: 376 LAFGGMKPVVSIYSTFYQRAYDQVLHDVCLPHANVVMAIDRAGVVGDDGPTHHGVFDISFLRVIPNLVFMAPKDENELRHMLYTSLQLDG-PVALRYPRSVGQGVEL 481
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CLOPE (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens GN=dxs PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.242e-25 Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGI 309 +A+EG+KPF A+YS+FLQR YDQV+HDV +QKLPV +DRAGLVG DG TH G FDI+F+S +PNM ++AP E+ ++ A+ + P R+PRG I Sbjct: 375 MAAEGLKPFFAVYSTFLQRAYDQVLHDVCIQKLPVTLCLDRAGLVGEDGETHQGIFDISFLSPMPNMTIVAPKCIDEMEVILKWASNF-NAPLAIRYPRGGDI 476
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CLOP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dxs PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.242e-25 Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGI 309 +A+EG+KPF A+YS+FLQR YDQV+HDV +QKLPV +DRAGLVG DG TH G FDI+F+S +PNM ++AP E+ ++ A+ + P R+PRG I Sbjct: 375 MAAEGLKPFFAVYSTFLQRAYDQVLHDVCIQKLPVTLCLDRAGLVGEDGETHQGIFDISFLSPMPNMTIVAPKCIDEMEVILKWASNF-NAPLAIRYPRGGDI 476
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CAMJR (1-deoxy-D-xylulose-5-phosphate synthase OS=Campylobacter jejuni (strain RM1221) GN=dxs PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.242e-25 Identity = 54/103 (52.43%), Postives = 71/103 (68.93%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGI 309 +A EG KPF AIYS+FLQR YDQV+HD + L V FAMDRAG+VG DG TH G FD++F++ LPN ++AP DE ++ + A + P FR+PRG+ I Sbjct: 370 MAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDE-QMMQNIMEYAYLHQGPIAFRYPRGSFI 471 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |