FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_TREPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=dxs PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.854e-20 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPR 297 LA GVKP A+YS+FLQR DQV+HDV +Q LPV FA+DRAG V DG TH G FD++ + +PN+ ++ P+ EL+ ++ A+ D P R+P+ Sbjct: 377 LACAGVKPVVAVYSTFLQRAVDQVIHDVAVQNLPVIFALDRAGAVPHDGETHQGLFDLSILRAVPNINILCPASAHELS-LLFGWALAQDTPVAIRYPK 474
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_TREPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Treponema pallidum GN=dxs PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.854e-20 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPR 297 LA GVKP A+YS+FLQR DQV+HDV +Q LPV FA+DRAG V DG TH G FD++ + +PN+ ++ P+ EL+ ++ A+ D P R+P+ Sbjct: 377 LACAGVKPVVAVYSTFLQRAVDQVIHDVAVQNLPVIFALDRAGAVPHDGETHQGLFDLSILRAVPNINILCPASAHELS-LLFGWALAQDTPVAIRYPK 474
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCTU (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium tuberculosis GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.952e-20 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCTA (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.952e-20 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCBT (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.952e-20 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCBP (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.952e-20 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCBO (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium bovis GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.952e-20 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G+DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOSR (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodococcus sp. (strain RHA1) GN=dxs PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.527e-19 Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRG 300 LA G+ P A+YS+FL R +DQ++ DV L KLPV +DRAG+ G DG +H G +D++ + +P M V AP D A L + A +DD P+ RFP+G Sbjct: 377 LALGGLHPVVAVYSTFLNRAFDQLLMDVALLKLPVTLVLDRAGITGNDGASHNGMWDMSLLGIVPGMKVAAPRDTATLREELDEALAVDDGPTALRFPKG 476
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium smegmatis GN=dxs PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DRAG+ G DG +H G +D++ + +P + V AP D A L + A ++D P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTMVLDRAGITGPDGASHNGMWDLSILGIIPGIRVAAPRDGARLRAELGEALAVNDGPTAIRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCGI (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium gilvum (strain PYR-GCK) GN=dxs PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P A+YS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L +A A + D P+ RFP+G+ Sbjct: 375 LAMGGMHPVVALYSTFLNRAFDQMLMDVALHKLPVTMVLDRSGITGPDGASHNGMWDLSILGIVPGMRVAAPRDGARLREELAEAVEVKDGPTAVRFPKGD 475 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |