FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_THEFY (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermobifida fusca (strain YX) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.443e-19 Identity = 42/100 (42.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRG 300 LA G+ P A+Y++FL R +DQV+ DV L + PV FA+DRAG+ G DG +H G +D++ + +PN+ + P D L ++ A IDD P+ R+P+G Sbjct: 377 LAMGGLHPVVAVYATFLNRCFDQVLMDVALHRQPVTFALDRAGITGDDGASHNGMWDLSILQVVPNLSIAVPRDAVRLRELLREAISIDDGPTVVRYPKG 476
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCSS (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain MCS) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.443e-19 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTLVLDRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain KMS) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.443e-19 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTLVLDRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium sp. (strain JLS) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.443e-19 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A ++D P+ RFP+G+ Sbjct: 375 LAMGGLHPVVAIYSTFLNRAFDQLMMDVALHKLPVTLVLDRSGVTGPDGASHNGMWDLSVLGIVPGMRVAAPRDGARLREELGEALDVNDAPTAIRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_MYCVP (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=dxs PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.578e-19 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L KLPV +DR+G+ G DG +H G +D++ + +P M V AP D A L + A + D P+ RFP+G+ Sbjct: 375 LAMGGMHPVVAIYSTFLNRAFDQMLMDVALHKLPVTVVLDRSGVTGPDGASHNGMWDLSILGIVPGMRVAAPRDGARLREELGEALDVSDGPTAIRFPKGD 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_LEPBL (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dxs PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18 Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ ++ + D P RFP+ N Sbjct: 382 MTNGSIIPYMCIYSTFLTRAIDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDMIDSLRWMETYDKAPIAIRFPKAN 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_LEPBJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dxs PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.293e-18 Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ ++ + D P RFP+ N Sbjct: 382 MTNGSIIPYMCIYSTFLTRAIDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDMIDSLRWMETYDKAPIAIRFPKAN 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_FUSNN (1-deoxy-D-xylulose-5-phosphate synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.688e-18 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPR 297 LA G KP+ IYS+F+QR Q++HDV +Q LPVRF +DR+G+VG DG TH G +D++F + N V+ P+ EL + + + P R PR Sbjct: 353 LAKSGKKPYVCIYSTFIQRAISQLIHDVSIQNLPVRFIIDRSGIVGEDGKTHNGIYDLSFFLSIQNFTVLCPTTAKELGQALEISKNFNLGPLVIRIPR 451
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_COREF (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium efficiens GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.688e-18 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G P AIYS+FL R +DQ++ DV L LPV +DR+G+ G+DG +H G +D+ S +P + V AP DE L ++ A I+D PS RFP+G+ Sbjct: 378 LALAGKHPVVAIYSTFLNRAFDQLLMDVALLNLPVTVVLDRSGVTGSDGASHNGVWDLALTSIVPGIRVAAPRDEDTLRELLGEAVDINDGPSVVRFPKGD 478
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS1_KITGR (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Kitasatospora griseola GN=dxs1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.688e-18 Identity = 41/100 (41.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRG 300 LA+ G+ P A+Y++FL R +DQV+ DV L +L V F +DRAG+ G DG +H G +D++ + +P + + AP D A + V A ++D P+ RFP+G Sbjct: 377 LATGGLHPVVAVYATFLNRAFDQVLMDVALHRLGVTFVLDRAGVTGNDGASHNGMWDLSVLQVVPGLRIAAPRDAARVREHVRQAVAVEDAPTVVRFPKG 476 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |