FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_STRGG (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=dxs PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.205e-18 Identity = 40/100 (40.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRG 300 LA+ G+ P A+Y++FL R +DQV+ DV L K V F +DRAG+ G DG +H G +D++ + C+P + + AP D ++ + A +DD P+ RF +G Sbjct: 376 LATGGLHPVFAVYATFLNRAFDQVLMDVALHKCGVTFVLDRAGITGTDGASHNGMWDMSILQCVPTLRIAAPRDADQVRAQLREAVAVDDAPTVVRFSKG 475
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_NOCFA (1-deoxy-D-xylulose-5-phosphate synthase OS=Nocardia farcinica GN=dxs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.912e-18 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIYS+FL R +DQ++ DV L K PV +DRAG+ G DG +H G +D++ + +P + V AP D A L + A + D P+ RFP+G+ Sbjct: 378 LALGGMHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAGITGPDGASHNGMWDLSLLGIIPGIRVAAPRDAATLREELGEALAVTDGPTVLRFPKGS 478
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_LEPIN (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira interrogans GN=dxs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.912e-18 Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +L + D P RFP+ + Sbjct: 381 MTNGNIIPYMCIYSTFLTRAMDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDLIDALRWMEKYDKSPVAIRFPKSS 481
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_LEPIC (1-deoxy-D-xylulose-5-phosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dxs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.912e-18 Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 + + + P+ IYS+FL R DQ+V DV L LPVRF +DRAG VG DG TH G FD+ ++ LPNM V PS+ +L + D P RFP+ + Sbjct: 381 MTNGNIIPYMCIYSTFLTRAMDQLVQDVSLMNLPVRFVIDRAGCVGPDGETHQGLFDLGYLLGLPNMDVFVPSNGQDLIDALRWMEKYDKSPVAIRFPKSS 481
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SACEN (1-deoxy-D-xylulose-5-phosphate synthase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.415e-18 Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAV 318 +A G+ P A+YS+FL R +DQ++ DV L + PV +DR+G+ G DG +H G +D++ + +P + V AP D L + A +DD P+ RFP+G+ I V Sbjct: 377 MAMGGLHPVFAVYSTFLNRAFDQLLMDVALHRQPVTVTLDRSGITGDDGASHNGMWDLSILGAIPGIQVAAPRDAVTLREELREAVAVDDGPTVMRFPKGSVIEEV 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOE4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.415e-18 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRG 300 LA G+ P AIYS+FL R +DQ++ DV L K PV +DRAG+ G DG +H G +D++ + +P + V AP D L + A ++DD P+ RFP+G Sbjct: 377 LALGGLHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAGVTGVDGASHNGVWDLSLLGIIPGIRVAAPRDADTLREELDEALLVDDGPTVVRFPKG 476
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_NOCSJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.415e-18 Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P A+Y +FL R +DQV+ DV L K V F +DR+G+ G DG +H G +D++ + +P + + AP D A L ++ A +DD P+ RFP+G+ Sbjct: 376 LAMGGMHPVVALYGTFLNRAFDQVLMDVALHKCGVTFVLDRSGVTGDDGASHNGMWDMSILQVVPGLRLAAPRDPARLRELLNEAVEVDDAPTVVRFPKGS 476
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_LEIXX (1-deoxy-D-xylulose-5-phosphate synthase OS=Leifsonia xyli subsp. xyli GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.415e-18 Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G+ P AIY++F+ R +DQV+ DV L K V F +DRAG+ G DGP+H G +D+ + +P + + AP D +A A + D P+ RFP+G+ Sbjct: 379 LAFGGLHPVVAIYATFMNRAFDQVLMDVALHKAGVTFVLDRAGVTGPDGPSHHGIWDLAILQVVPGIRLAAPRDATRFREELAEAVAVADAPTVLRFPKGS 479
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_FRASN (1-deoxy-D-xylulose-5-phosphate synthase OS=Frankia sp. (strain EAN1pec) GN=dxs PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.379e-18 Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRG 300 LA G+KP IY++FL R +DQV+ DV + + PV F +DRAG+ G DG +H G +D++F+ +P + + AP D A L + A D P+ R+P+G Sbjct: 377 LAMGGLKPVVCIYATFLNRAFDQVLMDVAMHRQPVTFVLDRAGITGEDGASHNGMWDMSFLQVVPGLAIAAPRDAATLRAELDEAVSNTDGPTVVRYPKG 476
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CORGL (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium glutamicum GN=dxs PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.379e-18 Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGN 303 LA G P AIYS+FL R +DQ++ DV + PV +DR+G+ G+DG +H G +D+ S +P + V AP DE L ++ A IDD P+ RFP+G+ Sbjct: 378 LALGGKHPVVAIYSTFLNRAFDQLLMDVGMLNQPVTLVLDRSGVTGSDGASHNGVWDMALTSIVPGVQVAAPRDEDSLRELLNEAISIDDGPTVVRFPKGD 478 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |