FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ANADF (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=dxs PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.195e-34 Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EGV+P AIYS+FLQR YD+++HDV LQ+LPV FA+DR GLVGADG TH GAFD+ ++ C+PN+VVMAPSDE EL HM+ T A+ D P+ FRFPRG G G L Sbjct: 377 LACEGVRPVVAIYSTFLQRAYDEIIHDVALQRLPVTFALDRGGLVGADGKTHQGAFDVAYLRCVPNLVVMAPSDENELRHMLHT-ALHHDGPAAFRFPRGAGEGVAL 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CYAP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=dxs PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.866e-34 Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P AIYS+FLQR YDQV+HDV +Q LPV F MDRAG+VGADGPTH G +DI ++ C+PN+V+MAP DEAEL M+ T D P R+PRGNG+G L Sbjct: 379 LACEGMRPVVAIYSTFLQRAYDQVIHDVCIQNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNLVIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGLGVPL 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHESR (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain MR-7) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.744e-34 Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG+ GA Sbjct: 381 ACEGFKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHESM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain MR-4) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.744e-34 Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG+ GA Sbjct: 381 ACEGFKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHESA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain ANA-3) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.744e-34 Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG+ GA Sbjct: 381 ACEGFKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEON (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella oneidensis GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.744e-34 Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG+ GA Sbjct: 381 ACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CYAP8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.744e-34 Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P AIYS+FLQR YDQV+HDV +Q LPV F MDRAG+VGADGPTH G +DI ++ C+PNM +MAP DEAEL M+ T D P R+PRGNGIG L Sbjct: 380 LACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGIGVPL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHESW (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain W3-18-1) GN=dxs PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.423e-33 Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T + PS R+PRG+ GA Sbjct: 381 ACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYNAGPSAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEPC (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=dxs PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.423e-33 Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T + PS R+PRG+ GA Sbjct: 381 ACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYNAGPSAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CHRVO (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromobacterium violaceum GN=dxs PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.423e-33 Identity = 66/105 (62.86%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 +A +G+KP AIYS+FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADGPTH GAFD++++ C+PNM VMAPSDE E ++ TA + D P+ R+PRG G GA Sbjct: 375 MACDGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVMFALDRAGLVGADGPTHAGAFDLSYLRCIPNMTVMAPSDENECRQLLYTAFQL-DTPTAVRYPRGTGPGA 478 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |