FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ACAM1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=dxs PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.423e-33 Identity = 64/107 (59.81%), Postives = 81/107 (75.70%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 +A EG++P AIYS+FLQRGYDQ++HDV +Q LPV F +DRAG+VGADGPTH G +DI ++ CLPNMV+MAP DEAEL M+ T D P R+PRG+G+G L Sbjct: 379 MACEGMRPVVAIYSTFLQRGYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCLPNMVMMAPKDEAELQQMLVTGINYTDGPIAMRYPRGSGLGVGL 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEWM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=dxs PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.858e-33 Identity = 66/104 (63.46%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG+KP AIYS+FLQRGYDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T +D P+ R+PRG+ GA Sbjct: 381 ACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSFMRTVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEB9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS195) GN=dxs PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.858e-33 Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAV 318 A EG KP AIYS+FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG+ GA+ Sbjct: 381 ACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAM 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEB5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dxs PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.427e-33 Identity = 67/104 (64.42%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQR YDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA Sbjct: 381 ACEGFKPVVAIYSTFLQRAYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CYAP4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxs PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.169e-33 Identity = 66/107 (61.68%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P IYS+FLQR YDQ+VHDV +Q LPV F MDRAG+VGADGPTH G +DI ++ CLPNMV+MAP DEAEL M+ T D P R+PRGNG G L Sbjct: 378 LACEGMRPVVTIYSTFLQRAYDQIVHDVCIQSLPVLFCMDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQQMLVTGINYMDGPIGLRYPRGNGYGVAL 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SYNY3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=dxs PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 4.139e-33 Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 +A EG++P AIYS+FLQRGYDQ++HDV +QKLPV F +DRAG+VGADGPTH G +DI ++ C+PN+V+MAP DEAEL M+ T R+PRGNGIG L Sbjct: 380 MACEGIRPVVAIYSTFLQRGYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNLVLMAPKDEAELQQMLVTGVNYTGGAIAMRYPRGNGIGVPL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_TRIEI (1-deoxy-D-xylulose-5-phosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=dxs PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.406e-33 Identity = 65/107 (60.75%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LASEG++P IYS+FLQR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +DI ++ C+PNMVVMAP DE EL MV T D R+PRGNG G L Sbjct: 380 LASEGMRPVVCIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVVMAPKDEGELQRMVLTGIKHTDGAIAMRYPRGNGYGVPL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEFN (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella frigidimarina (strain NCIMB 400) GN=dxs PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.406e-33 Identity = 64/104 (61.54%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A G+KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNM++MAPSDE E M+ T D P+ R+PRG GA Sbjct: 381 ACAGLKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMIIMAPSDENECRQMLYTGYCYQDGPTAVRYPRGFATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.406e-33 Identity = 66/104 (63.46%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 +A+ G+KPF A+YSSF+QRGYDQ+VHDV LQ LPVR +DRAGLVG DG TH GAFD++ ++ LPN VMA +DEAEL HMV TAA D P R+PRG G G Sbjct: 382 MAAAGLKPFLALYSSFVQRGYDQLVHDVALQNLPVRLMIDRAGLVGQDGATHAGAFDVSMLANLPNFTVMAAADEAELCHMVVTAAAHDSGPIALRYPRGEGRG 485
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.060e-33 Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T +D P+ R+PRG+ GA Sbjct: 381 ACEGYKPVVAIYSTFLQRGYDQMIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRIVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA 484 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |