FC930356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.060e-33 Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM +PNMV+MAPSDE E M+ T +D P+ R+PRG+ GA Sbjct: 381 ACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRIVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEB8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS185) GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.060e-33 Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA Sbjct: 381 ACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_SHEB2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS223) GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.060e-33 Identity = 66/104 (63.46%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGA 315 A EG KP AIYS+FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E M+ T D PS R+PRG GA Sbjct: 381 ACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGA 484
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_METFK (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.060e-33 Identity = 63/107 (58.88%), Postives = 83/107 (77.57%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 +A +G+KP AIYS+FLQR YDQ +HD+ LQ LPV FA+DRAGLVGADGPTH G+FD++++ C+PN+++MAPSDE E M+ T A + D PS R+PRG G GA + Sbjct: 373 MACDGLKPVVAIYSTFLQRAYDQFIHDIALQNLPVMFAIDRAGLVGADGPTHAGSFDLSYLRCIPNIIIMAPSDENECRQMLYT-AYLHDGPSAVRYPRGGGPGATI 478
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_GEOSW (1-deoxy-D-xylulose-5-phosphate synthase OS=Geobacillus sp. (strain WCH70) GN=dxs PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.221e-33 Identity = 69/107 (64.49%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA++G+KPF AIYS+FLQR YDQVVHDV Q L V FA+DRAGLVGADG TH G FDI F+ +PN+V+M P DE E HMV TA DD P RFPRGNG+G L Sbjct: 377 LATQGMKPFLAIYSTFLQRAYDQVVHDVCRQNLNVFFAIDRAGLVGADGETHQGVFDIAFLRHVPNLVIMMPKDENEGQHMVYTAIQYDDGPIALRFPRGNGLGVKL 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ANAD2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=dxs PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.221e-33 Identity = 66/107 (61.68%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P AIYS+FLQR YDQ++HDV LQKLPV FA+DR GLVGADG TH GAFD+ ++ C+P +VVMAPSDE EL HM+ T ++ D P+ R+PRG G G L Sbjct: 378 LACEGIRPVVAIYSTFLQRAYDQIIHDVALQKLPVTFALDRGGLVGADGKTHQGAFDLAYLRCVPGLVVMAPSDENELRHMLHT-SLQHDGPAALRYPRGAGEGVAL 483
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_METCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylococcus capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.204e-32 Identity = 66/103 (64.08%), Postives = 79/103 (76.70%), Query Frame = 1 Query: 4 ASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 ASEG KP AIYS+FLQR YDQ++HDV LQ LPV FA+DRAGLVG DGPTH G+FD++FM C+PNM++MAPSDE E M+ T I D P+ R+PRG G G Sbjct: 381 ASEGYKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGPDGPTHAGSFDLSFMRCIPNMLIMAPSDENECRQMLYT-GFIHDGPAAVRYPRGRGPG 482
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_LARHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dxs PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.204e-32 Identity = 65/104 (62.50%), Postives = 82/104 (78.85%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIG 312 +A +G+KP AIYS+FLQR YDQ++HDV LQ LPV FA+DRAGLVGADGPTH GAFD++++ C+PNMVVMAPSDE E ++ T A + D P+ R+PRG G G Sbjct: 376 MACDGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGPTHAGAFDLSYLRCIPNMVVMAPSDENECRQLLYT-AFLHDGPTAVRYPRGTGPG 478
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_ENT38 (1-deoxy-D-xylulose-5-phosphate synthase OS=Enterobacter sp. (strain 638) GN=dxs PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.573e-32 Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA G KP AIYS+FLQR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GAFD++F+ C+P+MVVM PSDE E M+ T D PS R+PRGN +G L Sbjct: 380 LAIGGYKPIVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSFLRCVPDMVVMTPSDENECRQMLFTGYHYQDGPSAVRYPRGNAVGVEL 486
BLAST of FC930356 vs. ExPASy Swiss-Prot
Match: DXS_CYAA5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=dxs PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.573e-32 Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 1 Query: 1 LASEGVKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFMSCLPNMVVMAPSDEAELTHMVATAAVIDDRPSCFRFPRGNGIGAVL 321 LA EG++P AIYS+FLQR YDQV+HDV +Q LPV F +DRAG+VGADGPTH G +DI ++ C+PN+ +MAP DEAEL MV T D P R+PRG+G+G L Sbjct: 380 LACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNLPVFFCLDRAGIVGADGPTHQGLYDIAYLRCIPNLTIMAPKDEAELQRMVVTGINHTDGPIAMRYPRGSGVGVPL 486 The following BLAST results are available for this feature:
BLAST of FC930356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930356 ID=FC930356; Name=FC930356; organism=Citrus clementina; type=EST; length=321bpback to top |