FC930368

Overview
NameFC930368
Unique NameFC930368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENOB_DICDI (Enolase B OS=Dictyostelium discoideum GN=enoB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35
Identity = 72/121 (59.50%), Postives = 97/121 (80.17%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD-LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPT+EV++ T + +F + VPSGASTGI+EA ELRDGDKS Y G GVLNA+ N+N+++ P L G+ + +Q  +D  M+E+DGT NKSK+G+NAI+GVS++V RA A  KGVPLY
Sbjct:    9 REILDSRGNPTLEVEVWTSEGMFSAKVPSGASTGIHEAFELRDGDKSRYFGYGVLNAIVNVNNLISPTLKGMRVDNQKAIDDKMIELDGTKNKSKLGSNAIVGVSMAVARAAASIKGVPLY 129          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_ZYMMO (Enolase OS=Zymomonas mobilis GN=eno PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.208e-35
Identity = 71/122 (58.20%), Postives = 96/122 (78.69%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            RQ++DSRGNPTVEVD+  +D    R+AVPSGASTG++EA+ELRDGDK+ +GGKGV  AV  +N+ +   ++G++  DQ  +D  M+++DGTPNK K GANAILGVSL+V +A A A+G+PLY
Sbjct:   10 RQVVDSRGNPTVEVDVTLEDGSFGRAAVPSGASTGVHEAVELRDGDKTRWGGKGVTKAVHAVNNEIANAIIGLEAEDQELIDQTMIKLDGTPNKGKFGANAILGVSLAVAKAAAEARGLPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_METAC (Enolase OS=Methanosarcina acetivorans GN=eno PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.208e-35
Identity = 72/121 (59.50%), Postives = 97/121 (80.17%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPT+EVD+ T   F R++VPSGASTG  EALELRD D + YGGKGVL AVKN+N I+  +L+G+D+R+Q E+D +M+E+D T NKS +GAN+ILGVS++V +A A +  +PLY
Sbjct:   22 REILDSRGNPTIEVDVFTPKGFGRASVPSGASTGTNEALELRDADPNRYGGKGVLTAVKNVNTIIQKELLGLDVRNQREIDELMIELDETENKSNLGANSILGVSMAVAKAAADSLNMPLY 142          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_BACP2 (Enolase OS=Bacillus pumilus (strain SAFR-032) GN=eno PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.208e-35
Identity = 71/122 (58.20%), Postives = 95/122 (77.87%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPTVEV++ T+     R+ VPSGASTG YEA+ELRDGDK  Y GKGVL AV N+N+I+ P+L+G D+ +Q  +D +++E+DGT NK K+GANAILGVS++V RA A    +PLY
Sbjct:   10 REVLDSRGNPTVEVEVYTESGGFGRALVPSGASTGEYEAVELRDGDKDRYLGKGVLTAVNNVNEIIAPELLGFDVTEQVAIDKMLIELDGTENKGKLGANAILGVSIAVARAAADFLQIPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_CUNEL (Enolase (Fragment) OS=Cunninghamella elegans PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 77/123 (62.60%), Postives = 95/123 (77.24%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD-LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV--GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            RQI DSRGNPTVEV++ TD  +FR+ VPSGASTG++EALELRDG KS Y GKGVL AV N+N I+  +LV   + + DQ  VD  ++++DGT NK K+GANAILGVSL+V +AGA  KGVP Y
Sbjct:    9 RQIFDSRGNPTVEVEVTTDKGVFRAGVPSGASTGVHEALELRDGVKSDYLGKGVLKAVGNVNTIINEELVKANLSVVDQKAVDDFLIQLDGTENKEKLGANAILGVSLAVAKAGAAEKGVPFY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_ASPOR (Enolase OS=Aspergillus oryzae GN=enoA PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 72/124 (58.06%), Postives = 99/124 (79.84%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD-LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV--GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYS 689
            R + DSRGNPTVEVD++T+  L R+ VPSGASTG +EA ELRDGDK+ +GGKGVL AV+N+N  + P ++   +D++DQ++VD  + ++DG+ NKS +GANAILGVSL++ +AGA  KGVPLY+
Sbjct:    9 RSVYDSRGNPTVEVDVVTETGLHRAIVPSGASTGQHEAHELRDGDKTHWGGKGVLKAVENVNKTIAPAVIEENLDVKDQSKVDEFLKKLDGSANKSNLGANAILGVSLAIAKAGAAEKGVPLYA 132          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_PYRFU (Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34
Identity = 75/121 (61.98%), Postives = 97/121 (80.17%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITD-DLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPTVEVD+ T   + R+AVPSGASTG +EALELRDG K  Y GKGV  AV+N+N I+ P+L+G+D+R Q E+DA++LE+DGT NKS +GANAIL VSL+V +A A +  +PLY
Sbjct:   13 REILDSRGNPTVEVDVYTHVGMGRAAVPSGASTGTHEALELRDGGKR-YHGKGVRRAVENVNKIIAPELIGMDVRWQREIDALLLELDGTENKSNVGANAILAVSLAVAKAAANSLELPLY 132          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_ENTFA (Enolase OS=Enterococcus faecalis GN=eno PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34
Identity = 71/122 (58.20%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPT+EV++ T+     R  VPSGASTG YEA+ELRDGDK+ Y GKGV  AV N+N+I+   ++G D+RDQ  +D  M+++DGTPNK K+GANAILGVS++V RA A    VPLY
Sbjct:   10 REVLDSRGNPTIEVEVYTESGAFGRGMVPSGASTGEYEAVELRDGDKARYLGKGVTKAVDNVNNIIAEAIIGYDVRDQMAIDKAMIDLDGTPNKGKLGANAILGVSIAVARAAADYLEVPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_EXIS2 (Enolase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=eno PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.383e-34
Identity = 72/123 (58.54%), Postives = 95/123 (77.24%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYS 689
            R+I+DSRGNPTVEV++ T+D    R+ VPSGASTG +EA+ELRDGDKS Y GKGVL AV N+N+ L P+++G D+ DQA +D  M+++DGT NK   GANAILG+S++  RA A   G+PLY+
Sbjct:   10 REILDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVLKAVDNVNEKLAPEIIGYDVFDQAGIDKKMIDLDGTKNKGNFGANAILGISMAAARAAADELGLPLYT 132          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_TREDE (Enolase OS=Treponema denticola GN=eno PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 73/122 (59.84%), Postives = 94/122 (77.05%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLF--RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPTVEV++   D    R+ VPSGASTG YEALE+RDGDKS Y GKGVL AV  +N ++  +L G D  DQAE+D +++ +DGT NKSK+GANA+LGVS++V RA A + G+PLY
Sbjct:   10 REILDSRGNPTVEVEVQLSDFSYGRACVPSGASTGEYEALEMRDGDKSRYMGKGVLKAVDQVNTVIAEELDGADALDQAEIDNMLINLDGTENKSKLGANAMLGVSMAVARAAADSLGLPLY 131          
The following BLAST results are available for this feature:
BLAST of FC930368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENOB_DICDI4.753e-3559.50Enolase B OS=Dictyostelium discoideum GN=enoB PE=3... [more]
ENO_ZYMMO6.208e-3558.20Enolase OS=Zymomonas mobilis GN=eno PE=1 SV=2[more]
ENO_METAC6.208e-3559.50Enolase OS=Methanosarcina acetivorans GN=eno PE=3 ... [more]
ENO_BACP26.208e-3558.20Enolase OS=Bacillus pumilus (strain SAFR-032) GN=e... [more]
ENO_CUNEL8.108e-3562.60Enolase (Fragment) OS=Cunninghamella elegans PE=2 ... [more]
ENO_ASPOR8.108e-3558.06Enolase OS=Aspergillus oryzae GN=enoA PE=2 SV=1[more]
ENO_PYRFU1.059e-3461.98Enolase OS=Pyrococcus furiosus GN=eno PE=3 SV=1[more]
ENO_ENTFA1.059e-3458.20Enolase OS=Enterococcus faecalis GN=eno PE=1 SV=1[more]
ENO_EXIS21.383e-3458.54Enolase OS=Exiguobacterium sibiricum (strain DSM 1... [more]
ENO_TREDE1.806e-3459.84Enolase OS=Treponema denticola GN=eno PE=3 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34006G08EF PostHarvC1 Citrus clementina cDNA clone C34006G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930368 ID=FC930368; Name=FC930368; organism=Citrus clementina; type=EST; length=690bp
GAAACGCCGGCAGGCAAATGAATTTATATTCAAATTAGAGCGCTGCTTGC
TTTCATCGCCACTTACCGGACTTTCCCACACTTTCTCACCAACTTTCCCT
CTTATATTAAAACTTTCTCTCCCACTTTCCCTCCTTCCAAACACGCTCTT
CAGTCAGACTTCCCAACCCAGATATGGCTTCTTCATTAACCAACCCCACC
GCCAGACCCTTGTTTTCCTCGAAGCTCAAACAGTCAACGCCTCCTCGGAG
TTATCGCCCCATGAGAGTGCAATGCTCCGTGGCTTCTACGGCGTCGTCCT
CGGCGAAGGTGAAGTCGGTGAAGGCCAGACAGATCATTGACAGCAGGGGA
AATCCGACGGTCGAGGTTGATCTGATCACCGATGATTTGTTTCGATCGGC
TGTCCCCAGTGGGGCCTCCACTGGAATCTACGAGGCATTGGAGCTCAGAG
ACGGAGATAAGAGTGTTTACGGCGGTAAAGGTGTGCTCAATGCCGTTAAG
AACATTAACGACATTCTGGGTCCCAAGCTCGTCGGAGTTGATATCAGAGA
TCAAGCTGAGGTGGATGCTATAATGCTGGAGATCGATGGGACTCCAAACA
AGTCAAAGATAGGGGCAAATGCGATATTAGGGGTATCTCTTAGCGTGTGT
AGAGCTGGTGCTGGAGCGAAAGGGGTGCCCTTGTACAGCA
back to top