FC930368

Overview
NameFC930368
Unique NameFC930368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_POLSQ (Enolase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 68/122 (55.74%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPTVE D++ +   + R+AVPSGASTG  EA+ELRDGDKS Y GKGVL AV+NIN  +   ++G+D  +QA +D  ++E+DGT NK+++GANA L VS++V RA A   G+PLY
Sbjct:   10 REVLDSRGNPTVECDVLLESGVMGRAAVPSGASTGSREAIELRDGDKSRYLGKGVLKAVQNINVEIAETILGLDASEQAFLDHTLIELDGTHNKARLGANATLAVSMAVARAAAEEAGLPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_POLNA (Enolase OS=Polaromonas naphthalenivorans (strain CJ2) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPTVE D++ +   + R+AVPSGASTG  EA+ELRDGDKS Y GKGVL AV  IN+ +   ++G+D  +QA +D  ++E+DGT NKS++GANA+L VS++V RA A   G+PLY
Sbjct:   10 REILDSRGNPTVECDVLLESGVMGRAAVPSGASTGSREAIELRDGDKSRYLGKGVLKAVGYINNEISEAVLGLDASEQAFLDRTLIELDGTENKSRLGANAMLAVSMAVARAAAEEAGLPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_LEPBL (Enolase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 75/122 (61.48%), Postives = 90/122 (73.77%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDL-ITDDLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+IIDSRGNPTVEVD+ + D  F R+AVPSGASTG YEA+ELRDGDK  Y GKGVL AV+++N  +   L G D  DQ  VD +ML+ DGT NK K+GANAILG SL+V +A A    +PLY
Sbjct:   13 REIIDSRGNPTVEVDVTLMDGSFGRAAVPSGASTGEYEAVELRDGDKQRYLGKGVLKAVEHVNVKIQEILKGQDALDQNRVDQLMLDADGTKNKGKLGANAILGTSLAVAKAAAFHSKLPLY 134          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_LEPBJ (Enolase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 75/122 (61.48%), Postives = 90/122 (73.77%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDL-ITDDLF-RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+IIDSRGNPTVEVD+ + D  F R+AVPSGASTG YEA+ELRDGDK  Y GKGVL AV+++N  +   L G D  DQ  VD +ML+ DGT NK K+GANAILG SL+V +A A    +PLY
Sbjct:   13 REIIDSRGNPTVEVDVTLMDGSFGRAAVPSGASTGEYEAVELRDGDKQRYLGKGVLKAVEHVNVKIQEILKGQDALDQNRVDQLMLDADGTKNKGKLGANAILGTSLAVAKAAAFHSKLPLY 134          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_HAEIG (Enolase OS=Haemophilus influenzae (strain PittGG) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLF--RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYS 689
            R+IIDSRGNPTVE ++  +  F   +A PSGASTG  EALELRDGDKS + GKGVL AV  +N+ +   +VG D  +QAE+D IM+++DGT NKS  GANAIL VSL+  +A A +KG+PLY+
Sbjct:   10 REIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVAAVNNEIAQAIVGKDATNQAEIDQIMIDLDGTENKSNFGANAILAVSLANAKAAAASKGLPLYA 132          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_HAEIE (Enolase OS=Haemophilus influenzae (strain PittEE) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLF--RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYS 689
            R+IIDSRGNPTVE ++  +  F   +A PSGASTG  EALELRDGDKS + GKGVL AV  +N+ +   +VG D  +QAE+D IM+++DGT NKS  GANAIL VSL+  +A A +KG+PLY+
Sbjct:   10 REIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVAAVNNEIAQAIVGKDATNQAEIDQIMIDLDGTENKSNFGANAILAVSLANAKAAAASKGLPLYA 132          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_HAEI8 (Enolase OS=Haemophilus influenzae (strain 86-028NP) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 71/123 (57.72%), Postives = 91/123 (73.98%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLF--RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLYS 689
            R+IIDSRGNPTVE ++  +  F   +A PSGASTG  EALELRDGDKS + GKGVL AV  +N+ +   +VG D  +QAE+D IM+++DGT NKS  GANAIL VSL+  +A A +KG+PLY+
Sbjct:   10 REIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVAAVNNEIAQAIVGKDATNQAEIDQIMIDLDGTENKSNFGANAILAVSLANAKAAAASKGLPLYA 132          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_ERWT9 (Enolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLF--RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+IIDSRGNPTVE ++  +  F   +A PSGASTG  EALELRDGDKS + GKGV  AV  +N  +   + G D +DQA +D IM+++DGT NKSK GANAIL VSL+  +A A AKG+PLY
Sbjct:   10 REIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAEAVTGKDAKDQANIDKIMIDLDGTENKSKFGANAILAVSLAAAKAAAAAKGMPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_BURXL (Enolase OS=Burkholderia xenovorans (strain LB400) GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 67/122 (54.92%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPTVE D++ +   + R+AVPSGASTG  EA+ELRDG+   YGGKGVL AV++IN  +   ++G+D  +QA +D  +LE+DGT NKS++GANA+L VS++V +A A   G+PLY
Sbjct:   10 REILDSRGNPTVECDVLLESGTMGRAAVPSGASTGSREAIELRDGEAGRYGGKGVLKAVEHINTEISEAIMGLDASEQAFLDKTLLELDGTDNKSRLGANAMLAVSMAVAKAAAEEAGLPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_BURPS (Enolase OS=Burkholderia pseudomallei GN=eno PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 67/122 (54.92%), Postives = 93/122 (76.23%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPTVE D++ +   + R+AVPSGASTG  EA+ELRDG+   YGGKGVL AV++IN  +   ++G+D  +QA +D  +LE+DGT NKS++GANA+L VS++V +A A   G+PLY
Sbjct:   10 REILDSRGNPTVECDVLLESGTMGRAAVPSGASTGSREAIELRDGEAGRYGGKGVLKAVEHINTEISEAIMGLDASEQAFLDKTLLELDGTDNKSRLGANAMLAVSMAVAKAAAEEAGLPLY 131          
The following BLAST results are available for this feature:
BLAST of FC930368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_POLSQ5.439e-3155.74Enolase OS=Polynucleobacter sp. (strain QLW-P1DMWA... [more]
ENO_POLNA5.439e-3156.56Enolase OS=Polaromonas naphthalenivorans (strain C... [more]
ENO_LEPBL5.439e-3161.48Enolase OS=Leptospira borgpetersenii serovar Hardj... [more]
ENO_LEPBJ5.439e-3161.48Enolase OS=Leptospira borgpetersenii serovar Hardj... [more]
ENO_HAEIG5.439e-3157.72Enolase OS=Haemophilus influenzae (strain PittGG) ... [more]
ENO_HAEIE5.439e-3157.72Enolase OS=Haemophilus influenzae (strain PittEE) ... [more]
ENO_HAEI85.439e-3157.72Enolase OS=Haemophilus influenzae (strain 86-028NP... [more]
ENO_ERWT95.439e-3158.20Enolase OS=Erwinia tasmaniensis (strain DSM 17950 ... [more]
ENO_BURXL5.439e-3154.92Enolase OS=Burkholderia xenovorans (strain LB400) ... [more]
ENO_BURPS5.439e-3154.92Enolase OS=Burkholderia pseudomallei GN=eno PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionC34006G08EF PostHarvC1 Citrus clementina cDNA clone C34006G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930368 ID=FC930368; Name=FC930368; organism=Citrus clementina; type=EST; length=690bp
GAAACGCCGGCAGGCAAATGAATTTATATTCAAATTAGAGCGCTGCTTGC
TTTCATCGCCACTTACCGGACTTTCCCACACTTTCTCACCAACTTTCCCT
CTTATATTAAAACTTTCTCTCCCACTTTCCCTCCTTCCAAACACGCTCTT
CAGTCAGACTTCCCAACCCAGATATGGCTTCTTCATTAACCAACCCCACC
GCCAGACCCTTGTTTTCCTCGAAGCTCAAACAGTCAACGCCTCCTCGGAG
TTATCGCCCCATGAGAGTGCAATGCTCCGTGGCTTCTACGGCGTCGTCCT
CGGCGAAGGTGAAGTCGGTGAAGGCCAGACAGATCATTGACAGCAGGGGA
AATCCGACGGTCGAGGTTGATCTGATCACCGATGATTTGTTTCGATCGGC
TGTCCCCAGTGGGGCCTCCACTGGAATCTACGAGGCATTGGAGCTCAGAG
ACGGAGATAAGAGTGTTTACGGCGGTAAAGGTGTGCTCAATGCCGTTAAG
AACATTAACGACATTCTGGGTCCCAAGCTCGTCGGAGTTGATATCAGAGA
TCAAGCTGAGGTGGATGCTATAATGCTGGAGATCGATGGGACTCCAAACA
AGTCAAAGATAGGGGCAAATGCGATATTAGGGGTATCTCTTAGCGTGTGT
AGAGCTGGTGCTGGAGCGAAAGGGGTGCCCTTGTACAGCA
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