FC930368

Overview
NameFC930368
Unique NameFC930368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15525 contig Ccv1_Contig15525:70..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_BIFLD (Enolase OS=Bifidobacterium longum (strain DJO10A) GN=eno PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.521e-36
Identity = 77/122 (63.11%), Postives = 96/122 (78.69%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLFRSA--VPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            RQI+DSRGNPTV+V L T+D  +    VPSGASTG  EA E RDGDKSVYGGKGVLNAVK +N+++ PK++G+D  DQ  +D +M+E+DGTPNK K+GANAILGVSL+   A A + G+PLY
Sbjct:   10 RQILDSRGNPTVQVVLDTEDGAQGLGLVPSGASTGEAEAWERRDGDKSVYGGKGVLNAVKAVNEVIAPKVIGMDAADQRALDDLMIELDGTPNKGKLGANAILGVSLAALYASAESAGLPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_METSB (Enolase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=eno PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36
Identity = 76/122 (62.30%), Postives = 96/122 (78.69%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDDLF--RSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRGNPTVEVD+  +D    R+AVPSGASTG +EA+ELRDGDKS YGGKGVL A++N+N  +   L G++  DQ  +D IM+ +DGTPNKSK+GANAILGVSL+V +A A A  +PLY
Sbjct:   10 REILDSRGNPTVEVDVTLEDGSHGRAAVPSGASTGAHEAVELRDGDKSRYGGKGVLKAIENVNRDIFEALSGLEAEDQGRIDEIMISLDGTPNKSKLGANAILGVSLAVAKAAADASALPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_CLOD6 (Enolase OS=Clostridium difficile (strain 630) GN=eno PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36
Identity = 73/122 (59.84%), Postives = 98/122 (80.33%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPTVEV+++ +D  + R+ VPSGASTG +EA+ELRDGDK  Y GKGV  AV N+N+I+ P++ G+D  DQ  +DAIM+E+DGTPNK K+GANAILGVS++V RA A   G+PL+
Sbjct:   10 REVLDSRGNPTVEVEVVLEDGAMGRAIVPSGASTGAFEAVELRDGDKGRYLGKGVETAVANVNEIIAPEIEGMDAFDQPAIDAIMIELDGTPNKGKLGANAILGVSMAVARAAADEIGLPLF 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_ALKMQ (Enolase OS=Alkaliphilus metalliredigens (strain QYMF) GN=eno PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36
Identity = 72/122 (59.02%), Postives = 98/122 (80.33%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPT+EV++  +   L R+ VPSGASTG +EA+ELRDGDK  Y GKGVL AV+N+NDI+ P++ G+D  DQ  +D IML++DGTPNK+K+GANAILGVS++V +A A A  +PL+
Sbjct:   10 REVLDSRGNPTIEVEVYLESGVLGRAIVPSGASTGAFEAVELRDGDKGRYLGKGVLKAVENVNDIIAPEITGLDALDQVAIDKIMLDLDGTPNKAKLGANAILGVSMAVAKAAAEALDIPLF 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENOB_CHICK (Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36
Identity = 79/123 (64.23%), Postives = 98/123 (79.67%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLIT-DDLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVG--VDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+I+DSRG PTVEVDL T    FR+AVPSGASTGI+EALE RDGDK  + GKGVL AV++IN  +GP L+   + + +Q ++D +M+E+DGT NKSK GANAILGVSL+VC+AGA  KGVPLY
Sbjct:    9 REILDSRGEPTVEVDLHTAKGHFRAAVPSGASTGIHEALEPRDGDKKRFLGKGVLKAVEHINKTIGPALIEKKISVVEQEKIDKVMIEMDGTENKSKFGANAILGVSLAVCKAGAAEKGVPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO1_DEBHA (Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.292e-36
Identity = 77/123 (62.60%), Postives = 98/123 (79.67%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD-LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLV--GVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R + DSRGNPTVEVD+ T++ LFR+ VPSGASTGI EA+ELRDGDKS + GKGV  AV N+N  + P L+  G+D ++Q E+D+ +L++DGTPNK  +GANAILGVSL+V +AGA AK VPLY
Sbjct:    9 RYVYDSRGNPTVEVDVTTENGLFRAIVPSGASTGINEAMELRDGDKSKWQGKGVTKAVDNVNKTIAPHLIKSGLDEKNQEEIDSFLLKLDGTPNKRSLGANAILGVSLAVAKAGAAAKQVPLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_THEAB (Enolase OS=Thermosipho africanus (strain TCF52B) GN=eno PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36
Identity = 73/122 (59.84%), Postives = 100/122 (81.97%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPTVEV+++ +D  + R+ VPSGASTG +EALELRDGDK  Y GKGVL AV+N+N+++ PKL+G++  DQ  +D ++LE+DGT NKSK+GANAILGVS++V RA A +  +PLY
Sbjct:   11 REVLDSRGNPTVEVEVMLEDGSIGRAIVPSGASTGKFEALELRDGDKKRYLGKGVLKAVENVNELIAPKLLGLNAYDQVYIDNVLLELDGTENKSKLGANAILGVSMAVARAAANSLQLPLY 132          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_LISW6 (Enolase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=eno PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPTVEV++ T+     R+ VPSGASTG YEA+ELRDGDK+ Y GKGVL AV+N+NDI+  K++G D+ DQ  +D  M+E+DGTPNK K+GANAILGVSL+  RA A   GV LY
Sbjct:   10 REVLDSRGNPTVEVEVYTEAGAFGRALVPSGASTGEYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPNKGKLGANAILGVSLAAARAAADELGVHLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_LISMO (Enolase OS=Listeria monocytogenes GN=eno PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPTVEV++ T+     R+ VPSGASTG YEA+ELRDGDK+ Y GKGVL AV+N+NDI+  K++G D+ DQ  +D  M+E+DGTPNK K+GANAILGVSL+  RA A   GV LY
Sbjct:   10 REVLDSRGNPTVEVEVYTEAGAFGRALVPSGASTGEYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPNKGKLGANAILGVSLAAARAAADELGVHLY 131          
BLAST of FC930368 vs. ExPASy Swiss-Prot
Match: ENO_LISMH (Enolase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=eno PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.299e-36
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 3
Query:  327 RQIIDSRGNPTVEVDLITDD--LFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLNAVKNINDILGPKLVGVDIRDQAEVDAIMLEIDGTPNKSKIGANAILGVSLSVCRAGAGAKGVPLY 686
            R+++DSRGNPTVEV++ T+     R+ VPSGASTG YEA+ELRDGDK+ Y GKGVL AV+N+NDI+  K++G D+ DQ  +D  M+E+DGTPNK K+GANAILGVSL+  RA A   GV LY
Sbjct:   10 REVLDSRGNPTVEVEVYTEAGAFGRALVPSGASTGEYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPNKGKLGANAILGVSLAAARAAADELGVHLY 131          
The following BLAST results are available for this feature:
BLAST of FC930368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_BIFLD2.521e-3663.11Enolase OS=Bifidobacterium longum (strain DJO10A) ... [more]
ENO_METSB3.292e-3662.30Enolase OS=Methylocella silvestris (strain BL2 / D... [more]
ENO_CLOD63.292e-3659.84Enolase OS=Clostridium difficile (strain 630) GN=e... [more]
ENO_ALKMQ3.292e-3659.02Enolase OS=Alkaliphilus metalliredigens (strain QY... [more]
ENOB_CHICK3.292e-3664.23Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3[more]
ENO1_DEBHA3.292e-3662.60Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV... [more]
ENO_THEAB4.299e-3659.84Enolase OS=Thermosipho africanus (strain TCF52B) G... [more]
ENO_LISW64.299e-3661.48Enolase OS=Listeria welshimeri serovar 6b (strain ... [more]
ENO_LISMO4.299e-3661.48Enolase OS=Listeria monocytogenes GN=eno PE=1 SV=1[more]
ENO_LISMH4.299e-3661.48Enolase OS=Listeria monocytogenes serotype 4a (str... [more]

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Properties
Property NameValue
Genbank descriptionC34006G08EF PostHarvC1 Citrus clementina cDNA clone C34006G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930368 ID=FC930368; Name=FC930368; organism=Citrus clementina; type=EST; length=690bp
GAAACGCCGGCAGGCAAATGAATTTATATTCAAATTAGAGCGCTGCTTGC
TTTCATCGCCACTTACCGGACTTTCCCACACTTTCTCACCAACTTTCCCT
CTTATATTAAAACTTTCTCTCCCACTTTCCCTCCTTCCAAACACGCTCTT
CAGTCAGACTTCCCAACCCAGATATGGCTTCTTCATTAACCAACCCCACC
GCCAGACCCTTGTTTTCCTCGAAGCTCAAACAGTCAACGCCTCCTCGGAG
TTATCGCCCCATGAGAGTGCAATGCTCCGTGGCTTCTACGGCGTCGTCCT
CGGCGAAGGTGAAGTCGGTGAAGGCCAGACAGATCATTGACAGCAGGGGA
AATCCGACGGTCGAGGTTGATCTGATCACCGATGATTTGTTTCGATCGGC
TGTCCCCAGTGGGGCCTCCACTGGAATCTACGAGGCATTGGAGCTCAGAG
ACGGAGATAAGAGTGTTTACGGCGGTAAAGGTGTGCTCAATGCCGTTAAG
AACATTAACGACATTCTGGGTCCCAAGCTCGTCGGAGTTGATATCAGAGA
TCAAGCTGAGGTGGATGCTATAATGCTGGAGATCGATGGGACTCCAAACA
AGTCAAAGATAGGGGCAAATGCGATATTAGGGGTATCTCTTAGCGTGTGT
AGAGCTGGTGCTGGAGCGAAAGGGGTGCCCTTGTACAGCA
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