FC930374

Overview
NameFC930374
Unique NameFC930374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 98/192 (51.04%), Postives = 129/192 (67.19%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  +LQLL G+ Y HD  VLHRDLK  NLL+N +G LKI DFG++R +G P++ YT  VVTLWYRAP++L+G+KKYST +D+WSVGCI AE++   PLF G +E DQ+ +IF+ LGTP    WP ++ELP    NF       + +  P  SF     L ESG DLL+++L  DP +RIT   AL H +F+E
Sbjct:  103 KSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT------VYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAF7 (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate 3D7) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 98/192 (51.04%), Postives = 129/192 (67.19%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  +LQLL G+ Y HD  VLHRDLK  NLL+N +G LKI DFG++R +G P++ YT  VVTLWYRAP++L+G+KKYST +D+WSVGCI AE++   PLF G +E DQ+ +IF+ LGTP    WP ++ELP    NF       + +  P  SF     L ESG DLL+++L  DP +RIT   AL H +F+E
Sbjct:  103 KSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT------VYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.093e-50
Identity = 97/196 (49.49%), Postives = 135/196 (68.88%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + QLL+G+ + H + VLHRDLK  NLL+N +G +K+ DFG++R +G P++ YT  VVTLWYRAPE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E VWPG++ +P  K +F K      R+ F        P L E G  LL+++L YDP KRI+   AL H +F++V  P
Sbjct:  105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK----WARQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.093e-50
Identity = 97/196 (49.49%), Postives = 135/196 (68.88%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + QLL+G+ + H + VLHRDLK  NLL+N +G +K+ DFG++R +G P++ YT  VVTLWYRAPE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E VWPG++ +P  K +F K      R+ F        P L E G  LL+++L YDP KRI+   AL H +F++V  P
Sbjct:  105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK----WARQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.093e-50
Identity = 97/196 (49.49%), Postives = 135/196 (68.88%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + QLL+G+ + H + VLHRDLK  NLL+N +G +K+ DFG++R +G P++ YT  VVTLWYRAPE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E VWPG++ +P  K +F K      R+ F        P L E G  LL+++L YDP KRI+   AL H +F++V  P
Sbjct:  105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK----WARQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.040e-50
Identity = 95/197 (48.22%), Postives = 133/197 (67.51%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNN-QGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + Q+L GV Y H + VLHRDLK  NLL++     +K+ DFG++R +G P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCI AE++ +KPLF G +E+D++ KIF+ +GTP E +WPG++ LP  K++F K P        P    T  P L  +G DLL ++L  DP KRIT   AL H +F+++ LP
Sbjct:   92 KMFLCQILRGVAYCHSHRVLHRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELHKIFRIIGTPNEDIWPGVTSLPDFKSSFPKWP--------PKELATIVPNLGATGLDLLCKMLQLDPSKRITAKKALEHEYFKDIVLP 280          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.276e-50
Identity = 97/196 (49.49%), Postives = 134/196 (68.37%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + QLL+G+ + H + VLHRDLK  NLL+N  G +K+ DFG++R +G P++ YT  VVTLWYRAPE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E VWPG++ +P  K +F K      R+ F        P L E G  LL+++L YDP KRI+   AL H +F++V  P
Sbjct:  105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINADGSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK----WARQDFSKV----VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.276e-50
Identity = 95/192 (49.48%), Postives = 132/192 (68.75%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  M QL+ G+K+ H + VLHRDLK  NLL++ +G LK+ DFG++R +G PL+ YT  VVTLWYRAPE+LLG K+YST VDMWSVGCI AE+  +KPLF G +E+D+I +IF+ LGTP E +WP ++ LP  K++F +     L +  P+        L  +G DLL+++L YDP +RI+   AL H +F +
Sbjct:  111 KRFMNQLIRGIKHCHSHRVLHRDLKPQNLLIDKEGNLKLADFGLARAFGVPLRAYTHEVVTLWYRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRIFRILGTPNEEIWPDVNYLPDFKSSFPQWKKKPLSEAVPS--------LDANGIDLLDQMLVYDPSRRISAKRALIHPYFND 294          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.891e-50
Identity = 97/203 (47.78%), Postives = 135/203 (66.50%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNH-YWFREVPLPKSKDFM 606
            K  + QLL+GV + H + V+HRDLK  NLL+N  G +K+ DFG++R +G PL+ YT  VVTLWYRAPE+LLG+K Y+TAVD+WS+GCI AE++ +K LF G +E+DQ+ +IF+ LGTP+E  WPG+++LP  K +F K     L +  P         L   G DLL +LL YDP +RIT   AL H Y+    P P ++ ++
Sbjct:  105 KSYLFQLLQGVSFCHSHRVIHRDLKPQNLLINELGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRIFRMLGTPSEDTWPGVTQLPDYKGSFPKWTRKGLEEIVPN--------LEPEGRDLLMQLLQYDPSQRITAKTALAHPYFSSPEPSPAARQYV 299          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 6.891e-50
Identity = 96/196 (48.98%), Postives = 134/196 (68.37%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + QLL+G+ + H + VLHRDLK  NLL+N+ G +K+ DFG++R +G P++ +T  VVTLWYRAPE+LLG K YSTAVD+WS+GCI AE++ ++ LF G +E+DQ+ +IF+TLGTP E  WPG++ +P  K+ F K     +R+ F        P L E G DLL ++L YD  KRI+   AL H +FR+V  P
Sbjct:  105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINSDGAIKLADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEMITRRALFPGDSEIDQLFRIFRTLGTPDEVSWPGVTTMPDYKSTFPK----WIRQDFSKV----VPPLDEDGRDLLAQMLQYDSNKRISAKVALTHPFFRDVSRP 292          
The following BLAST results are available for this feature:
BLAST of FC930374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2H_PLAFK1.389e-5051.04Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAF71.389e-5051.04Cell division control protein 2 homolog OS=Plasmod... [more]
CDK2_RAT3.093e-5049.49Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MESAU3.093e-5049.49Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDK2_CRIGR3.093e-5049.49Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDC2B_ANTMA4.040e-5048.22Cell division control protein 2 homolog B (Fragmen... [more]
CDK2_BOVIN5.276e-5049.49Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDC28_CANAL5.276e-5049.48Cell division control protein 28 OS=Candida albica... [more]
CDK3_HUMAN6.891e-5047.78Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDK2_XENLA6.891e-5048.98Cell division protein kinase 2 OS=Xenopus laevis G... [more]

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Properties
Property NameValue
Genbank descriptionC34006H03EF PostHarvC1 Citrus clementina cDNA clone C34006H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930374 ID=FC930374; Name=FC930374; organism=Citrus clementina; type=EST; length=690bp
AAATGCTTGATGCTACAGCTTTTAGAGGGTGTCAAGTATCTTCATGATAA
TTGGGTGCTTCACAGGGATTTGAAAACATCAAATCTTCTTTTGAATAACC
AGGGCGTTTTAAAGATTTGCGACTTTGGGATGTCACGCCAGTATGGAAGC
CCACTAAAGCCATATACATCACTGGTTGTCACATTATGGTATAGAGCTCC
GGAACTTCTACTTGGAGCAAAGAAGTATTCTACTGCAGTTGACATGTGGT
CAGTTGGTTGTATAATGGCTGAACTTTTGGCCAAAAAACCATTGTTTAGT
GGGACAACTGAAGTTGACCAAATTGACAAGATTTTCAAAACACTAGGCAC
TCCAACTGAGACAGTTTGGCCTGGGTTATCTGAGTTGCCAGGAGCCAAAG
CAAATTTTGCTAAACAACCGTATAATCTGTTGCGGAAGAGGTTTCCTGCC
GCTTCTTTTACAGGATCTCCAGTTCTCTCAGAGTCCGGATTTGATTTGTT
AAACAGACTTTTGACTTATGACCCTGAGAAGCGAATAACGGTAGATGACG
CCCTTAATCATTATTGGTTCCGTGAGGTTCCTCTTCCCAAATCCAAGGAC
TTCATGCCTACCTTCCCCCCCCAGCATGCTAGGAACAAGTAGCTGATGAT
ATGACTGAACGTGGCATTATATAATTCAGATAACTTTTTG
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