FC930374

Overview
NameFC930374
Unique NameFC930374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.175e-49
Identity = 96/194 (49.48%), Postives = 134/194 (69.07%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + Q+L G+ Y H + VLHRDLK  NLL++ Q   LK+ DFG++R +G P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCI AE++ +KPLF G +E+D++ KIF+TLGTP E  WPG++ LP  K++F K     + K   A      P L  +G DLLN++L  DP KRIT  +AL H +F+++
Sbjct:  105 KRFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRQTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRTLGTPNEETWPGVTSLPDFKSSFPK----WISKDLSAV----VPNLDPAGIDLLNKMLCLDPSKRITARNALEHEYFKDI 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.175e-49
Identity = 94/192 (48.96%), Postives = 132/192 (68.75%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  +LQLL G+ Y H++ VLHRDLK  NLL+N +G LKI DFG++R +G P++ YT  VVTLWYRAP++L+G+KKYST +DMWSVGCI AE++  +PLF G +E DQ+ +IF+ LGTP    WP ++ELP    +F      ++ +  P  +F     L ++G DLL+++L  DP +RIT   AL H +F+E
Sbjct:  103 KSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVNGRPLFPGVSETDQLMRIFRILGTPNSENWPNVTELPKYDPDF------MVYEPLPWETFLKG--LDDTGIDLLSKMLRLDPNQRITAKQALEHAYFKE 286          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.535e-49
Identity = 93/192 (48.44%), Postives = 133/192 (69.27%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  +LQLL G+ Y H++ VLHRDLK  NLL+N +G LKI DFG++R +G P++ YT  VVTLWYRAP++L+G+KKYST +D+WSVGCI AE++  +PLF G +E DQ+ +IF+ LGTP    WP ++ELP    +F      ++ +  P  +F     L ++G DLL+++L  DP +RIT  +AL H +F+E
Sbjct:  103 KSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFRILGTPNSANWPSVTELPKYDPDF------IVYEPLPWETFLKG--LDDTGIDLLSKMLRLDPNQRITAKEALQHAYFKE 286          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.005e-49
Identity = 97/197 (49.24%), Postives = 135/197 (68.53%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAK-QPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPL 585
            K  + Q+L GV Y H + VLHRDLK  NLL++ +   LK+ DFG++R +G P++ +T  VVTLWYRAPE+LLG+++YST VDMWSVGCI AE++ +KPLF G +E+D++ KIF+ LGTP E  WPG+S LP  K+ F K Q  +L          T  P L  +G DLL+++L Y+P KRIT   AL H +F+++ +
Sbjct:  105 KSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKSAFPKWQAQDLA---------TIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDLEM 292          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49
Identity = 94/191 (49.21%), Postives = 125/191 (65.45%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFR 573
            K  M QL+EG+++ H + VLHRDLK  NLL++  G LK+ DFG++R +G PL+ YT  VVTLWYR+PE+LLG ++YST VDMWS G I AE+  +KPLF G +E+D+I KIF+ LGTP ET+WPG++  P  K  F K     ++   P         L E G DLL  LL YDP +RI+   A  H +F+
Sbjct:  125 KKFMAQLIEGIRFCHSHRVLHRDLKPQNLLIDRDGNLKLADFGLARAFGVPLRTYTHEVVTLWYRSPEILLGGRQYSTGVDMWSCGAIFAEMCTRKPLFPGDSEIDEIFKIFRILGTPDETIWPGVTSFPDFKPTFPKWKREDIQNVVPG--------LEEDGLDLLEALLEYDPARRISAKQACMHPYFQ 307          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49
Identity = 94/197 (47.72%), Postives = 127/197 (64.47%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPK 591
            K    Q+L+ + + H   V+HRDLK  NLL++N G +K+ DFG++R  G P++ YT  VVTLWYRAPE+L+GA++YS  VDMWS+GCI AE+  KKPLF G +E+D++ +IF+ LGTPTE  W G+  LP  KA F K   N LR +F     TG  +L ++ F LL  LL YDP  R+    AL H +F  +   K
Sbjct:  124 KSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDNNGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRVLGTPTELEWNGVESLPDYKATFPKWRENFLRDKFYDKK-TGKHLLDDTAFSLLEGLLIYDPSLRLNAKKALVHPYFDNMDTSK 319          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.420e-49
Identity = 93/197 (47.21%), Postives = 130/197 (65.99%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPK 591
            K    Q+L+ + + H   V+HRDLK  NLL++ +G +K+ DFG++R  G P++ YT  VVTLWYRAPE+L+GA++YS  VDMWS+GCI AE+  KKPLF G +E+D++ +IF+ LGTPTE  W G+  LP  KA F K   N LR +F     +G+ ++ E  F LL  LL YDP  RI+   AL+H +F ++   K
Sbjct:  118 KSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKGAIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRILGTPTELEWNGVESLPDYKATFPKWRENFLRDKFYDKK-SGNYLMDEDAFSLLEGLLIYDPALRISSKKALHHPYFNDIDTSK 313          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.467e-49
Identity = 94/199 (47.24%), Postives = 135/199 (67.84%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFA---KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + Q+L G+ Y HD+ +LHRDLK  NLL+N +GVLK+ DFG++R +  P++ YT  VVTLWYRAP++L+G+KKYSTAVD+WSVGCI AE++   PLF G +E DQ+ +IFK LGTP+   WP +  LP    +F+   KQ ++ +            P L+ESG DL++R+L  DP +RI+  +AL H +F+++  P
Sbjct:  103 KSFLYQILRGISYCHDHRILHRDLKPQNLLINREGVLKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPSVDSWPQVVNLPAYNPDFSYYEKQSWSSI-----------VPKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDLHRP 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49
Identity = 95/201 (47.26%), Postives = 126/201 (62.69%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKAN---FAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKS 594
            K  M QLL+G+ + HDN VLHRDLK  NLL+NN+G LK+ DFG++R +G P   +++ VVTLWYRAP++LLG++ Y+T++D+WS GCI AE+   KPLF GT   DQ+ KIF+ +GTP E  WPG+S+    K N   F  Q   L+            P L   G +LL  LL   PE RIT   AL H WF E+ +P +
Sbjct:  109 KSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNKGELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTTSIDIWSAGCIFAEMCTGKPLFPGTANEDQLIKIFRLMGTPNERTWPGISQYTNYKNNWQIFVPQDLRLI-----------VPNLDSMGLNLLQSLLQMRPESRITARQALQHPWFHEITMPNA 298          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49
Identity = 94/199 (47.24%), Postives = 133/199 (66.83%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFA---KQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  + Q+L G+ Y HD+ +LHRDLK  NLL+N +GVLK+ DFG++R +  P++ YT  VVTLWYRAP++L+G+KKYSTAVD+WSVGCI AE++   PLF G +E DQ+ +IFK LGTP    WP +  LP    +F    KQ ++ +            P L+ESG DL++R+L  DP +RI+  +AL H +F+++  P
Sbjct:  103 KSFLYQILRGISYCHDHRILHRDLKPQNLLINREGVLKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMINGVPLFPGISEQDQLKRIFKILGTPNVDSWPQVVNLPAYNPDFCYYEKQAWSSI-----------VPKLNESGIDLISRMLQLDPVQRISAKEALKHDYFKDLHRP 290          
The following BLAST results are available for this feature:
BLAST of FC930374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_CHERU1.175e-4949.48Cell division control protein 2 homolog OS=Chenopo... [more]
CDC2H_PLAVI1.175e-4948.96Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAKH1.535e-4948.44Cell division control protein 2 homolog OS=Plasmod... [more]
CDKA1_ORYSJ2.005e-4949.24Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2_EMENI3.420e-4949.21Cell division control protein 2 OS=Emericella nidu... [more]
CDC2_CAEEL3.420e-4947.72Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2_CAEBR3.420e-4947.21Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2H_THEPA4.467e-4947.24Cell division control protein 2 homolog OS=Theiler... [more]
PHO85_CANAL7.619e-4947.26Negative regulator of the PHO system OS=Candida al... [more]
CDC2H_THEAN7.619e-4947.24Cell division control protein 2 homolog OS=Theiler... [more]

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Properties
Property NameValue
Genbank descriptionC34006H03EF PostHarvC1 Citrus clementina cDNA clone C34006H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930374 ID=FC930374; Name=FC930374; organism=Citrus clementina; type=EST; length=690bp
AAATGCTTGATGCTACAGCTTTTAGAGGGTGTCAAGTATCTTCATGATAA
TTGGGTGCTTCACAGGGATTTGAAAACATCAAATCTTCTTTTGAATAACC
AGGGCGTTTTAAAGATTTGCGACTTTGGGATGTCACGCCAGTATGGAAGC
CCACTAAAGCCATATACATCACTGGTTGTCACATTATGGTATAGAGCTCC
GGAACTTCTACTTGGAGCAAAGAAGTATTCTACTGCAGTTGACATGTGGT
CAGTTGGTTGTATAATGGCTGAACTTTTGGCCAAAAAACCATTGTTTAGT
GGGACAACTGAAGTTGACCAAATTGACAAGATTTTCAAAACACTAGGCAC
TCCAACTGAGACAGTTTGGCCTGGGTTATCTGAGTTGCCAGGAGCCAAAG
CAAATTTTGCTAAACAACCGTATAATCTGTTGCGGAAGAGGTTTCCTGCC
GCTTCTTTTACAGGATCTCCAGTTCTCTCAGAGTCCGGATTTGATTTGTT
AAACAGACTTTTGACTTATGACCCTGAGAAGCGAATAACGGTAGATGACG
CCCTTAATCATTATTGGTTCCGTGAGGTTCCTCTTCCCAAATCCAAGGAC
TTCATGCCTACCTTCCCCCCCCAGCATGCTAGGAACAAGTAGCTGATGAT
ATGACTGAACGTGGCATTATATAATTCAGATAACTTTTTG
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