FC930374

Overview
NameFC930374
Unique NameFC930374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.951e-49
Identity = 95/192 (49.48%), Postives = 127/192 (66.15%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  M+QL +G+ Y H + +LHRDLK  NLL+N  G LK+ DFG++R +G PL+ YT  +VTLWYRAPE+LLG K+YST VD WS+GCI AE+  +KP+FSG +E+DQI KIF+ LGTP E +WP +  LP  K +F +     L +  P+        L   G DLL++LL YDP  RI+   A  H +F+E
Sbjct:  114 KKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGNLKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRKDLSQVVPS--------LDPRGIDLLDKLLAYDPINRISARRAAIHPYFQE 297          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.697e-48
Identity = 94/193 (48.70%), Postives = 127/193 (65.80%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + Q+LEG+ + H   VLHRDLK  NLL++N+GV+K+ DFG++R +G P++ YT  VVTLWYRAPE+LLGA +YST VD+WS+G I AEL  KKPLF G +E+DQ+ +IF+TLGTP   VWP +  LP  K  F K     L              L ++G DLL ++L YDP KRI+   A+ H +F ++
Sbjct:  106 KSYLYQILEGILFCHCRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPVRVYTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAELATKKPLFHGDSEIDQLFRIFRTLGTPNNEVWPDVESLPDYKNTFPKWKSGNLASTVKN--------LDKNGIDLLTKMLIYDPPKRISARQAMTHPYFDDL 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.697e-48
Identity = 96/192 (50.00%), Postives = 130/192 (67.71%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  +LQLL G+ Y H++ VLHRDLK  NLL+N +G LKI DFG++R +G P + YT  VVTLWYRAP++L+G+KKYST +D+WSVGCI AE++  +PLF G +E DQ+ +IFK LGTP    WP + +LP    NF    YN L    P  +F     L ++G DLL+++L  DP +RIT   A+ H +F+E
Sbjct:  103 KSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGASETDQLMRIFKILGTPNSQNWPDVFKLPKYDPNF--PVYNPL----PWETFIKG--LDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 286          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2A_ANTMA (Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.697e-48
Identity = 93/194 (47.94%), Postives = 132/194 (68.04%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + Q+L G+ Y H + VLHRDLK  NLL++ +   LK+ DFG++R +G P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCI AE++ ++PLF G +E+D++ KIF+ +GTP E  WPG++ LP  K+ F K P     K   A      P L  SG DLL+++L  DP KRIT  +AL H +F+++
Sbjct:  105 KMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVMGTPNEETWPGVTSLPDFKSAFPKWP----AKELAAV----VPNLDASGLDLLDKMLRLDPSKRITARNALQHEYFKDI 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: BUR1_YEAST (Serine/threonine-protein kinase BUR1 OS=Saccharomyces cerevisiae GN=SGV1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.217e-48
Identity = 104/217 (47.93%), Postives = 135/217 (62.21%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-------------GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPT 612
            K +MLQ+LEG+ Y+H    +HRD+KT+N+L+++ GVLK+ DFG++R Y             GS  K YTS+VVT WYRAPEL+LG K+Y+TAVD+W VGC+ AE   KKP+  G T++DQ   IFK LGTPTE  W     LPGA+          LR+RF          LSE+G D L +LL  DP KR+T   A +H WF+E PLP  K  +PT
Sbjct:  173 KNMMLQILEGLNYIHCAKFMHRDIKTANILIDHNGVLKLADFGLARLYYGCPPNLKYPGGAGSGAK-YTSVVVTRWYRAPELVLGDKQYTTAVDIWGVGCVFAEFFEKKPILQGKTDIDQGHVIFKLLGTPTEEDWAVARYLPGAELTTTNYK-PTLRERF-------GKYLSETGLDFLGQLLALDPYKRLTAMSAKHHPWFKEDPLPSEKITLPT 380          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKE1_ORYSJ (Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.895e-48
Identity = 103/220 (46.82%), Postives = 137/220 (62.27%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG----VLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT--------EVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSES--GFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPT 612
            K L+ QLL G+ YLH NW++HRDLK SN+L+  +G    ++KI DFG++R Y +PLKP +   +VVT+WYRAPELLLGAK Y++AVDMW+VGCI AELL  KPLF G          ++DQ+DKIFK LG PT   WP L+ LP     +     ++   ++          L +    FDLL+++L YDP KRIT   AL H +FR  PLP     +P+
Sbjct:  136 KSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPFQLDQLDKIFKVLGHPTVEKWPTLANLP----CWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFDLLSKMLEYDPRKRITAAQALEHEYFRMDPLPGRNALLPS 351          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.781e-48
Identity = 92/193 (47.67%), Postives = 127/193 (65.80%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + QLL+G+ Y H + +LHRDLK  NLL++ QG LK+ DFG++R    P++ YT  +VTLWYRAPE+LLG+K YS  VDMWSVGCI  E+L KKPLFSG  E+DQI +IF+ LGTP +++WPG+++LP   + F   P     K FP               DL+ ++L Y+P KRI+  +AL H +F ++
Sbjct:  107 KSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQGALKLADFGLARAVSIPVRVYTHEIVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKKPLFSGDCEIDQIFRIFRVLGTPDDSIWPGVTKLPEYVSTFPNWPGQPYNKIFPRC--------EPLALDLIAKMLQYEPSKRISAKEALLHPYFGDL 291          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.781e-48
Identity = 93/192 (48.44%), Postives = 129/192 (67.19%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K  +LQLL G+ Y H++ VLHRDLK  NLL+N +G LKI DFG++R +G P + YT  VVTLWYRAP++L+G+KKYST +D+WSVGCI AE++  +PLF G +E DQ+ +IFK LGTP    WP + +LP    NF       + +  P  +F     L ++G DLL+++L  DP +RIT   A+ H +F+E
Sbjct:  104 KSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFKILGTPNSQNWPDVFKLPKYDPNFP------VYEPLPWETFIKG--LDDTGIDLLSKMLKLDPNQRITAKQAIEHPYFKE 287          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKE1_ARATH (Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 4.939e-48
Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLL----NNQGVLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT--------EVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSES--GFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFP 618
            K L+ QLL G+ YLH NW++HRDLK SN+L+       G++KI DFG++R Y +PLKP +   +VVT+WYRAPELLLG+K Y++AVDMW+VGCI AELL  KPLF G          ++DQ+DKIFK LG PT   WP L  LP    ++     ++   ++ +        L++    +DLL+++L YDP KRIT   AL H +FR  PLP    F+ + P
Sbjct:  132 KSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDAEEHGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGSKHYTSAVDMWAVGCIFAELLTLKPLFQGAEAKSSQNPFQLDQLDKIFKILGHPTMDKWPTLVNLP----HWQNDVQHIQAHKYDSVGLHNVVHLNQKSPAYDLLSKMLEYDPLKRITASQALEHEYFRMDPLPGRNAFVASQP 349          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 6.450e-48
Identity = 92/190 (48.42%), Postives = 127/190 (66.84%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 570
            K  M QLL+GV + HD+ VLHRDLK  NLL+N +G LK+ DFG++R +G P++ Y+  VVTLWYRAP++L+G++KYST +D+WS GCI AE+ + +PLF G+   DQ+ +IFK LGTP E  WP ++ELP  K +F   P + L              L E G +LL+++L YDP +RIT   AL H +F
Sbjct:  104 KSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINRKGELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRIFKILGTPNEESWPSITELPEYKTDFPVHPAHQLSSIVHG--------LDEKGLNLLSKMLQYDPNQRITAAAALKHPYF 285          
The following BLAST results are available for this feature:
BLAST of FC930374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC28_YEAST9.951e-4949.48Cell division control protein 28 OS=Saccharomyces ... [more]
CDC2_CARAU1.697e-4848.70Cell division control protein 2 homolog OS=Carassi... [more]
CDC2H_PLABA1.697e-4850.00Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2A_ANTMA1.697e-4847.94Cell division control protein 2 homolog A OS=Antir... [more]
BUR1_YEAST2.217e-4847.93Serine/threonine-protein kinase BUR1 OS=Saccharomy... [more]
CDKE1_ORYSJ2.895e-4846.82Cyclin-dependent kinase E-1 OS=Oryza sativa subsp.... [more]
CDC2_DICDI3.781e-4847.67Cell division control protein 2 homolog OS=Dictyos... [more]
CDC2H_PLAYO3.781e-4848.44Cell division control protein 2 homolog OS=Plasmod... [more]
CDKE1_ARATH4.939e-4845.95Cyclin-dependent kinase E-1 OS=Arabidopsis thalian... [more]
CDK5_DICDI6.450e-4848.42Cell division protein kinase 5 homolog OS=Dictyost... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34006H03EF PostHarvC1 Citrus clementina cDNA clone C34006H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930374 ID=FC930374; Name=FC930374; organism=Citrus clementina; type=EST; length=690bp
AAATGCTTGATGCTACAGCTTTTAGAGGGTGTCAAGTATCTTCATGATAA
TTGGGTGCTTCACAGGGATTTGAAAACATCAAATCTTCTTTTGAATAACC
AGGGCGTTTTAAAGATTTGCGACTTTGGGATGTCACGCCAGTATGGAAGC
CCACTAAAGCCATATACATCACTGGTTGTCACATTATGGTATAGAGCTCC
GGAACTTCTACTTGGAGCAAAGAAGTATTCTACTGCAGTTGACATGTGGT
CAGTTGGTTGTATAATGGCTGAACTTTTGGCCAAAAAACCATTGTTTAGT
GGGACAACTGAAGTTGACCAAATTGACAAGATTTTCAAAACACTAGGCAC
TCCAACTGAGACAGTTTGGCCTGGGTTATCTGAGTTGCCAGGAGCCAAAG
CAAATTTTGCTAAACAACCGTATAATCTGTTGCGGAAGAGGTTTCCTGCC
GCTTCTTTTACAGGATCTCCAGTTCTCTCAGAGTCCGGATTTGATTTGTT
AAACAGACTTTTGACTTATGACCCTGAGAAGCGAATAACGGTAGATGACG
CCCTTAATCATTATTGGTTCCGTGAGGTTCCTCTTCCCAAATCCAAGGAC
TTCATGCCTACCTTCCCCCCCCAGCATGCTAGGAACAAGTAGCTGATGAT
ATGACTGAACGTGGCATTATATAATTCAGATAACTTTTTG
back to top