FC930374

Overview
NameFC930374
Unique NameFC930374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.756e-45
Identity = 91/194 (46.91%), Postives = 127/194 (65.46%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQ-GVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + Q+L G+ Y H + VLHRDLK  NLL++ +   LK+ DFG++R +G P++ +T  VVTLWYRAPE+LLG+  YST VD+WSVGCI AE++++KPLF G +E+DQ+ KIF+ +GTP E  W G++ LP  K+ F K          P    T  P L   G DLL+++L  DP KRI    AL H +F+++
Sbjct:  105 KTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSVGCIFAEMISQKPLFPGDSEIDQLFKIFRIMGTPYEDTWRGVTSLPDYKSAFPKWK--------PTDLETFVPNLDPDGVDLLSKMLLMDPTKRINARAALEHEYFKDL 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK7_DICDI (Cell division protein kinase 7 OS=Dictyostelium discoideum GN=cdk7 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.756e-45
Identity = 90/190 (47.37%), Postives = 124/190 (65.26%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWF 570
            K  M  LL+G++  H NWVLHRDLK +NLL++  G LK+ DFG++RQYGSP K ++   VT++YRAPELL GAK Y  +VD+WS+GCI AEL+ + P   GT E+DQ+ KI   LGTP E+ WPG++ LP     F   P    ++ F AA        S+   DL++++L ++P  RI+  DALNH +F
Sbjct:  108 KSYMKMLLQGIEACHRNWVLHRDLKPNNLLMSINGDLKLADFGLARQYGSPNKVFSPQAVTIFYRAPELLFGAKSYGPSVDIWSIGCIFAELMLRTPYLPGTGEIDQLRKICSALGTPNESNWPGVTCLPN-YIKFTDHPATPFKQLFTAA--------SDEAIDLISKMLLFNPSNRISAADALNHPYF 288          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.756e-45
Identity = 89/194 (45.88%), Postives = 127/194 (65.46%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLN-NQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + Q+L G+ Y H + VLHRDLK  NLL++ +   +K+ DFG++R +G P++ +T  VVTLWYRAPE+LLG++ YST VD+WSVGCI AE++ ++PLF G +E+D++ KIF+  GTP E  WPG++ LP  K+ F K P   L         T  P L  +G DLL+     DP +RIT   AL H +F+++
Sbjct:  105 KMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNAVKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMINQRPLFPGDSEIDELFKIFRITGTPNEETWPGVTSLPDFKSAFPKWPAKDLA--------TQVPNLEPAGLDLLSSTCRLDPTRRITARGALEHEYFKDI 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK8_DICDI (Probable cyclin-dependent kinase 8 OS=Dictyostelium discoideum GN=cdk8 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.294e-45
Identity = 99/231 (42.86%), Postives = 141/231 (61.04%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQG----VLKICDFGMSRQYGSPLKPYTS--LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT---------EVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPY-NLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMP--TFPPQHARNK 639
            K L+ Q+L G+ YLH NWV+HRDLK SN+L+  +G     +KI DFG++R + SPLKP     +VVT+WYR+PELLLG+K Y+ AVD+W++GCI AEL+  KPLF G           + DQ++KI + LG PT  +WP +  LP  K   + + + N L K             +   +DLL++++ YDP KRIT  +AL+H +F+E+PLP    F     +PP+   NK
Sbjct:  150 KSLIWQVLNGIHYLHSNWVIHRDLKPSNILVMGEGKECGTVKIGDFGLARIFQSPLKPLNENGVVVTIWYRSPELLLGSKHYTRAVDIWAIGCIFAELITTKPLFPGKEKDPKIPSLFQDDQVEKIIRVLGKPTLDMWPDIKHLPEWKRLSSMEAFPNSLAKCVGIDE-------NSQAYDLLSKMILYDPSKRITASEALDHPYFKELPLPLPNAFSKPIPYPPRLPINK 373          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.294e-45
Identity = 86/193 (44.56%), Postives = 123/193 (63.73%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  M Q+L+ V + H N +LHRDLK  NLL++  G +K+ DFG++R +  P++ YT  VVTLWYRAPE+LLG K YST VD+WS+GCI +E++ ++ LF G +E+DQ+ +IF+TL TP ET WPG+++LP  K  F +             +    P+      +L+  +L YDP  RI+  DAL H +FR V
Sbjct:  108 KSYMHQILDAVGFCHTNRILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMIMRRSLFPGDSEIDQLYRIFRTLSTPDETNWPGVTQLPDFKTKFPRW----------EGTNMPQPITEHEAHELIMSMLCYDPNLRISAKDALQHAYFRNV 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2B_XENLA (Cell division control protein 2-B OS=Xenopus laevis GN=cdc2-B PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.294e-45
Identity = 89/193 (46.11%), Postives = 125/193 (64.77%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + Q+L+G+ + H   VLHRDLK  NLL++N+GV+K+ DFG++R +G P++ YT  VVTLWYRA E+LLG+ +YST VD+WSVG I AE+  KKPLF G +E+DQ+ +IF++LGTP   VWP +  L   K  F K     L              + E G DLL+++L YDP KRI+   A+ H +F ++
Sbjct:  106 KSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRASEVLLGSVRYSTPVDVWSVGTIFAEIATKKPLFHGDSEIDQLFRIFRSLGTPNNEVWPEVESLQDYKNTFPKWKGGSLSSNVKN--------IDEDGLDLLSKMLVYDPAKRISARKAMLHPYFDDL 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: BUR1_EMENI (Serine/threonine-protein kinase bur1 OS=Emericella nidulans GN=ptkA PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.294e-45
Identity = 95/225 (42.22%), Postives = 132/225 (58.67%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-----------GSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKA--NFAKQPYNLLRKRFPAASFTGSPVLSESG---FDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQH 627
            KC M+QLLEG+KYLH N +LHRD+K +NLL++NQG+L+I DFG++R +           G   + YT+LVVT WYR PELLL  ++Y++A+DMW VGC+  E+   KP+ +G ++++Q   IF  +GTPTE   PG S LPG +   +F  +P NL            + V  + G     LL  LL  D  KR+   DAL H +F   PLP     +P+F   H
Sbjct:  133 KCYMIQLLEGLKYLHGNCILHRDMKAANLLISNQGILQIADFGLARPFDEAPPQPGKGAGEAKRDYTTLVVTRWYRPPELLLQLRRYTSAIDMWGVGCVFGEMFKGKPILAGNSDLNQAQLIFSLVGTPTEENMPGWSSLPGCEGVKHFGNRPGNL------------AEVFKDQGPMAISLLTELLKLDWRKRVNAIDALKHPYFSTPPLPARPGDLPSFEDSH 345          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: BUR1_ASPFU (Serine/threonine-protein kinase bur1 OS=Aspergillus fumigatus GN=bur1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.294e-45
Identity = 97/222 (43.69%), Postives = 131/222 (59.01%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP-----------LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKA--NFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQH 627
            KC MLQLLEG+KYLH N +LHRD+K +NLL++N GVL+I DFG++R Y  P            + YT+LVVT WYR PELLL  ++Y+TA+DMW VGC+  E+   KP+ +G+++++Q   IF  +GTPTE   PG S LPG +   +F  +P   LR+ F           +     LL  LL  D  KRI   DA+NH +F   P P     +P+F   H
Sbjct:  133 KCYMLQLLEGLKYLHGNRILHRDMKAANLLISNNGVLQIADFGLARPYDEPPPEPGKGGGEAKRDYTTLVVTRWYRPPELLLQLRRYTTAIDMWGVGCVFGEMFKGKPILAGSSDLNQTQLIFNLVGTPTEENMPGWSSLPGCEGVKSFGYKP-GSLREVFKDQ--------NPMAISLLEELLKLDWRKRINAIDAINHPYFSSPPFPARPGELPSFEDSH 345          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKC2_ORYSJ (Cyclin-dependent kinase C-2 OS=Oryza sativa subsp. japonica GN=CDKC-2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.996e-45
Identity = 96/210 (45.71%), Postives = 130/210 (61.90%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP-YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQH 627
            KC M QLL G+ Y H N VLHRD+K SNLL++N+G LK+ DFG++R + S      T+ V+TLWYR PELLLG+ +Y  AVDMWSVGCI AELL  KP+ +G  E +Q+ KIF+  GTP E +WPG++++P       ++P     KR    SF       +   DLL ++LT DP +RI+  DAL+  +F   PLP     +P +   H
Sbjct:  142 KCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGSTRYGPAVDMWSVGCIFAELLNGKPILTGKNEPEQLSKIFELCGTPDELIWPGVTKMPWYNNFKPQRP----MKRRVKESFKH---FDQHALDLLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYEASH 344          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: PHO85_CANGA (Negative regulator of the PHO system OS=Candida glabrata GN=PHO85 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.913e-45
Identity = 88/193 (45.60%), Postives = 130/193 (67.36%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQ-PYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K    QLLEG+ + H+N +LHRDLK  NLL+  +G LK+ DFG++R +G P+  ++S VVTLWYRAP++L+G++ YST++D+WS GCI+AE++  KPLF GT + +Q+  IF  +GTP ET WPG++ LP    NF ++ P +L  +  P   +   P L ++  DLL+ LL  +P+ R++   AL H WF E
Sbjct:  110 KYFQWQLLEGLAFCHENKILHRDLKPQNLLITKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDKMGTPNETTWPGVTSLPKYNPNFQQRLPKDLKAELQP---YVKEP-LDDNVIDLLHGLLQLNPDMRLSAKQALLHPWFSE 298          
The following BLAST results are available for this feature:
BLAST of FC930374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKA1_ARATH1.756e-4546.91Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDK7_DICDI1.756e-4547.37Cell division protein kinase 7 OS=Dictyostelium di... [more]
CDC22_MEDSA1.756e-4545.88Cell division control protein 2 homolog 2 OS=Medic... [more]
CDK8_DICDI2.294e-4542.86Probable cyclin-dependent kinase 8 OS=Dictyosteliu... [more]
CDC2C_DROME2.294e-4544.56Cell division control protein 2 cognate OS=Drosoph... [more]
CDC2B_XENLA2.294e-4546.11Cell division control protein 2-B OS=Xenopus laevi... [more]
BUR1_EMENI2.294e-4542.22Serine/threonine-protein kinase bur1 OS=Emericella... [more]
BUR1_ASPFU2.294e-4543.69Serine/threonine-protein kinase bur1 OS=Aspergillu... [more]
CDKC2_ORYSJ2.996e-4545.71Cyclin-dependent kinase C-2 OS=Oryza sativa subsp.... [more]
PHO85_CANGA3.913e-4545.60Negative regulator of the PHO system OS=Candida gl... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34006H03EF PostHarvC1 Citrus clementina cDNA clone C34006H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930374 ID=FC930374; Name=FC930374; organism=Citrus clementina; type=EST; length=690bp
AAATGCTTGATGCTACAGCTTTTAGAGGGTGTCAAGTATCTTCATGATAA
TTGGGTGCTTCACAGGGATTTGAAAACATCAAATCTTCTTTTGAATAACC
AGGGCGTTTTAAAGATTTGCGACTTTGGGATGTCACGCCAGTATGGAAGC
CCACTAAAGCCATATACATCACTGGTTGTCACATTATGGTATAGAGCTCC
GGAACTTCTACTTGGAGCAAAGAAGTATTCTACTGCAGTTGACATGTGGT
CAGTTGGTTGTATAATGGCTGAACTTTTGGCCAAAAAACCATTGTTTAGT
GGGACAACTGAAGTTGACCAAATTGACAAGATTTTCAAAACACTAGGCAC
TCCAACTGAGACAGTTTGGCCTGGGTTATCTGAGTTGCCAGGAGCCAAAG
CAAATTTTGCTAAACAACCGTATAATCTGTTGCGGAAGAGGTTTCCTGCC
GCTTCTTTTACAGGATCTCCAGTTCTCTCAGAGTCCGGATTTGATTTGTT
AAACAGACTTTTGACTTATGACCCTGAGAAGCGAATAACGGTAGATGACG
CCCTTAATCATTATTGGTTCCGTGAGGTTCCTCTTCCCAAATCCAAGGAC
TTCATGCCTACCTTCCCCCCCCAGCATGCTAGGAACAAGTAGCTGATGAT
ATGACTGAACGTGGCATTATATAATTCAGATAACTTTTTG
back to top