FC930374

Overview
NameFC930374
Unique NameFC930374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: BUR1_ASHGO (Serine/threonine-protein kinase BUR1 OS=Ashbya gossypii GN=BUR1 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.913e-45
Identity = 98/216 (45.37%), Postives = 139/216 (64.35%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQY-GSP--LK---------PYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYN-LLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMP 609
            K +MLQ+LEG+ Y+H    +HRD+KT+N+LL+++G+LKI DFG++R Y G+P  LK          YTS+VVT WYRAPEL+LG K Y+TAVD+W +GC+ AE   K+P+  G T++DQ   IFK +GTP+++ W     LPGA+    +  Y    ++RF          L+E G DLL+ LL+ DP KR+T   A+ H +F E PLPK +  +P
Sbjct:  179 KNMMLQILEGINYIHCKKFMHRDIKTANILLDHKGILKIADFGLARNYYGAPPNLKYPGGAGTDAKYTSVVVTRWYRAPELVLGDKNYTTAVDIWGIGCVFAEFFEKRPILQGKTDIDQGHVIFKLMGTPSDSDWQLARYLPGAE--LTRTSYEPTYKERF-------GKYLTEKGLDLLSTLLSLDPYKRLTAMAAMQHPFFSEDPLPKLQLTLP 385          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.675e-45
Identity = 88/192 (45.83%), Postives = 129/192 (67.19%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K    QLL+GV + H+N +LHRDLK  NLL+NN+G LK+ DFG++R +G P+  ++S VVTLWYRAP++L+G++ Y T++D+WS GCI+AE++  KPLF G+ + +Q+  IF T+GTP E  WP +++L  AK N    P+ + R            VL ++  DLL+ LL  +P+ R++  DALNH WF E
Sbjct:  111 KYFQWQLLQGVAFCHENRILHRDLKPQNLLINNRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRNYCTSIDIWSCGCILAEMIMGKPLFPGSNDEEQLKLIFDTMGTPVEQTWPQVTQL--AKYNPLLPPH-MPRDLKQLLQNNTEEVLDDNVVDLLHGLLQLNPDARLSAKDALNHPWFAE 299          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKD2_ARATH (Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.675e-45
Identity = 87/196 (44.39%), Postives = 120/196 (61.22%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  ML  L+G+ Y H  WVLHRD+K +NLL+   G+LK+ DFG++R +GSP + +T  V   WYRAPELL G+++Y   VD+W+ GCI AELL ++P   G+TE+DQ+ KIF+  GTP  + W  +  LP     F+  P   LR  FP A        S+   DLL ++  YDP +RIT+  AL+H +F   P P
Sbjct:  113 KSYMLMTLKGLAYCHKKWVLHRDMKPNNLLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYRAPELLFGSRQYGAGVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQWSDMIYLPD-YMEFSYTPAPPLRTIFPMA--------SDDALDLLAKMFIYDPRQRITIQQALDHRYFSSSPSP 299          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.675e-45
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLP 588
            K  ML  L+G++YLH +W+LHRDLK +NLLL+  GVLK+ DFG+++ +GSP + YT  VVT WYRAPELL GA+ Y   VDMW+VGCI+AELL + P   G +++DQ+ +IF+TLGTPTE  WP +  LP     F   P   L   F AA   G  +L     DL+  L  ++P  RIT   AL   +F   P P
Sbjct:  115 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD-YVTFKSFPGIPLHHIFSAA---GDDLL-----DLIQGLFLFNPCARITATQALKMKYFSNRPGP 301          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.675e-45
Identity = 87/187 (46.52%), Postives = 121/187 (64.71%), Query Frame = 1
Query:   16 QLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            QL+ GV + H   ++HRDLK  NLL++ +G LK+ DFG++R +G PL+ YT  +VTLWYRAPE+LLG++ YST VD+WSVGCI AE++ + PLF G +E+D+I KIF+ LGTP E VWPG++ L   K+ F +     L K  P           E   +LL+ +L YDP  RI+   AL   + R+
Sbjct:  117 QLVNGVNFCHSRRIIHRDLKPQNLLIDKEGNLKLADFGLARSFGVPLRNYTHEIVTLWYRAPEVLLGSRHYSTGVDIWSVGCIFAEMIRRSPLFPGDSEIDEIFKIFQVLGTPNEEVWPGVTLLQDYKSTFPRWKRMDLHKVVPNG--------EEDAIELLSAMLVYDPAHRISAKRALQQNYLRD 295          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: SSN3_YARLI (Serine/threonine-protein kinase SSN3 OS=Yarrowia lipolytica GN=SSN3 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.717e-45
Identity = 100/211 (47.39%), Postives = 133/211 (63.03%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTS---LVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTT-----------EVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFP---AASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVP 582
            K ++ QLL GV YLH NWVLHRDLK +N ++ + GVLKI D G++R + +PL+   S   +VVT+WYRAPELLLGA+ YS AVD+W+VGCI AELLA +P+F G             + +Q+ KI + LG+P E  WP LS+ P  ++   KQ      K FP    A +      ++ GF LL+RLL YDP KR+T +DAL H +F E P
Sbjct:  151 KSILWQLLNGVSYLHQNWVLHRDLKPANTMVTSDGVLKIGDLGLARLFSNPLQSLYSGDKVVVTIWYRAPELLLGARHYSPAVDLWAVGCIFAELLALRPIFKGEEAKMDNKTNVPFQRNQMQKIIEILGSPQEDDWPSLSKFPEYES--LKQ-----MKTFPPNLEAWYQSIGGTNQKGFQLLSRLLEYDPAKRLTANDALLHPYFTEAP 354          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDC2A_XENLA (Cell division control protein 2-A OS=Xenopus laevis GN=cdc2-A PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.717e-45
Identity = 88/193 (45.60%), Postives = 125/193 (64.77%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREV 579
            K  + Q+L+G+ + H   VLHRDLK  NLL++++GV+K+ DFG++R +G P++ YT  VVTLWYRAPE+LLG+ +YST VD+WS+G I AE+  KKPLF G +E+DQ+ +IF+ LGTP   VWP +  L   K +F K     L              + + G DLL ++L YDP KRI+   AL H +F ++
Sbjct:  106 KSYLYQILQGIVFCHSRRVLHRDLKPQNLLIDSKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSVRYSTPVDVWSIGTIFAEIATKKPLFHGDSEIDQLFRIFRALGTPNNEVWPEVESLQDYKNSFPKWKGGSLSANVKN--------IDKDGLDLLAKMLIYDPAKRISARKALLHPYFDDL 290          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 85/192 (44.27%), Postives = 129/192 (67.19%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFRE 576
            K    QLL+G+ + H+N +LHRDLK  NLL+N +G LK+ DFG++R +G P+  ++S VVTLWYRAP++L+G++ YST++D+WS GCI+AE++  KPLF GT + +Q+  IF  +GTP E++WP +++LP    N  ++P   LR+       T  P L  +  D L+ LL  +P+ R++   AL+H WF E
Sbjct:  111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQ--VLQPHTKEP-LDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 97/210 (46.19%), Postives = 130/210 (61.90%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSP-LKPYTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQH 627
            KC M QLL G+ Y H N VLHRD+K SNLL++N+G LK+ DFG++R Y        T+ V+TLWYR PELLLGA KY  A+DMWSVGCI AELL  KP+  G  E +Q++KIF+  G+P E +WPG+S++P    NF  +P   L++R     F           +LL ++L  DP +RI+  DAL+  +F   PLP     +PT+   H
Sbjct:  142 KCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAELLHAKPILPGKNEQEQLNKIFELCGSPDEKLWPGVSKMPWFN-NF--KPARPLKRR--VREFFRH--FDRHALELLEKMLVLDPAQRISAKDALDAEYFWTDPLPCDPKSLPTYESSH 344          
BLAST of FC930374 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.326e-44
Identity = 99/210 (47.14%), Postives = 129/210 (61.43%), Query Frame = 1
Query:    1 KCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNQGVLKICDFGMSRQYGSPLKP-YTSLVVTLWYRAPELLLGAKKYSTAVDMWSVGCIMAELLAKKPLFSGTTEVDQIDKIFKTLGTPTETVWPGLSELPGAKANFAKQPYNLLRKRFPAASFTGSPVLSESGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQH 627
            KC M QLL G+ Y H N VLHRD+K SNLL++N+G LK+ DFG++R + +      T+ V+TLWYR PELLLG+ KY  AVDMWSVGCI AELL  KP+  G  E +Q+ KIF   GTP E+ WPG++++P    N  K P  L  KR     F     L+    DLL ++LT DP +RI+  DAL+  +F   PLP     +P +   H
Sbjct:  142 KCYMKQLLTGLHYCHINQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLNGKPILPGKNEPEQLSKIFDVCGTPDESNWPGVTKMPW--YNNFKPPRQL--KRRVKEYFKHFDRLA---LDLLEKMLTLDPAQRISAQDALDAEYFWSDPLPCDPKSLPKYESSH 344          
The following BLAST results are available for this feature:
BLAST of FC930374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BUR1_ASHGO3.913e-4545.37Serine/threonine-protein kinase BUR1 OS=Ashbya gos... [more]
PHO85_KLULA6.675e-4545.83Negative regulator of the PHO system OS=Kluyveromy... [more]
CDKD2_ARATH6.675e-4544.39Cyclin-dependent kinase D-2 OS=Arabidopsis thalian... [more]
CDK7_HUMAN6.675e-4547.96Cell division protein kinase 7 OS=Homo sapiens GN=... [more]
CDC2_SCHPO6.675e-4546.52Cell division control protein 2 OS=Schizosaccharom... [more]
SSN3_YARLI8.717e-4547.39Serine/threonine-protein kinase SSN3 OS=Yarrowia l... [more]
CDC2A_XENLA8.717e-4545.60Cell division control protein 2-A OS=Xenopus laevi... [more]
PHO85_YEAST2.536e-4444.27Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
CDKC1_ARATH2.536e-4446.19Cyclin-dependent kinase C-1 OS=Arabidopsis thalian... [more]
CDKC1_ORYSJ4.326e-4447.14Cyclin-dependent kinase C-1 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionC34006H03EF PostHarvC1 Citrus clementina cDNA clone C34006H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930374 ID=FC930374; Name=FC930374; organism=Citrus clementina; type=EST; length=690bp
AAATGCTTGATGCTACAGCTTTTAGAGGGTGTCAAGTATCTTCATGATAA
TTGGGTGCTTCACAGGGATTTGAAAACATCAAATCTTCTTTTGAATAACC
AGGGCGTTTTAAAGATTTGCGACTTTGGGATGTCACGCCAGTATGGAAGC
CCACTAAAGCCATATACATCACTGGTTGTCACATTATGGTATAGAGCTCC
GGAACTTCTACTTGGAGCAAAGAAGTATTCTACTGCAGTTGACATGTGGT
CAGTTGGTTGTATAATGGCTGAACTTTTGGCCAAAAAACCATTGTTTAGT
GGGACAACTGAAGTTGACCAAATTGACAAGATTTTCAAAACACTAGGCAC
TCCAACTGAGACAGTTTGGCCTGGGTTATCTGAGTTGCCAGGAGCCAAAG
CAAATTTTGCTAAACAACCGTATAATCTGTTGCGGAAGAGGTTTCCTGCC
GCTTCTTTTACAGGATCTCCAGTTCTCTCAGAGTCCGGATTTGATTTGTT
AAACAGACTTTTGACTTATGACCCTGAGAAGCGAATAACGGTAGATGACG
CCCTTAATCATTATTGGTTCCGTGAGGTTCCTCTTCCCAAATCCAAGGAC
TTCATGCCTACCTTCCCCCCCCAGCATGCTAGGAACAAGTAGCTGATGAT
ATGACTGAACGTGGCATTATATAATTCAGATAACTTTTTG
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