FC930380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_RHIL3 (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpD PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 5.407e-46 Identity = 91/115 (79.13%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD +EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 65 MDSSEGLVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQSTESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAH 179
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_RHILW (ATP synthase subunit beta OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=atpD PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.223e-46 Identity = 91/115 (79.13%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD +EGLVRGQ V +TG+PI VPVG TLGRIMNVIGEP+DE G L T H IH++AP++VEQ+TE QILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 65 MDSSEGLVRGQEVSDTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAH 179
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_RHISN (ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.205e-45 Identity = 90/115 (78.26%), Postives = 101/115 (87.83%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD TEGLVRGQ V +TG PI+VPVG+ TLGRIMNVIGEP+DE G ++T IH++APA+VEQ+TE QILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 90 MDSTEGLVRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPVETSSRRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 204
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_CAEEL (ATP synthase subunit beta, mitochondrial OS=Caenorhabditis elegans GN=atp-2 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 2.055e-45 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MDGTEGLVRGQ V +TG PI +PVG TLGRIMNVIGEPIDE+G + ++++ IH EAP FVE + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 122 MDGTEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 236
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_DROME (ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster GN=ATPsyn-beta PE=1 SV=3) HSP 1 Score: 180.259 bits (456), Expect = 2.684e-45 Identity = 89/115 (77.39%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MDGTEGLVRGQ+VL+TG PI +PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FV+ + EQ+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 90 MDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 204
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_NEUCR (ATP synthase subunit beta, mitochondrial OS=Neurospora crassa GN=atp-2 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.578e-45 Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MDGTEGLVRG + +TG+PIT+PVG TLGRI+NV G+PIDE+G +KT+ + PIH EAP FVEQ+T +ILVTGIKVVDLLAPY RGGKIGLFGGAGVGKTV I ELINN+AKAH Sbjct: 102 MDGTEGLVRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPIKTDKFRPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAH 216
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_HYPNA (ATP synthase subunit beta OS=Hyphomonas neptunium (strain ATCC 15444) GN=atpD PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 5.978e-45 Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 339 MD TEGLVRGQ V + G+PITVPVG TLGRIMNVIGEPIDE+G + + Y+PIH +APAFV+QATE ++LVTGIKV+DLL PY +GGKIGLFGGAGVGKTVLIMEL+NN+AK Sbjct: 61 MDSTEGLVRGQPVSDIGTPITVPVGPATLGRIMNVIGEPIDERGPVNADTYMPIHAQAPAFVDQATESEVLVTGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIMELVNNIAK 173
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_RHORU (ATP synthase subunit beta OS=Rhodospirillum rubrum GN=atpD PE=1 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 1.020e-44 Identity = 86/115 (74.78%), Postives = 97/115 (84.35%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGKTVLI ELINNVAK H Sbjct: 59 MDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELINNVAKGH 173
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_RHORT (ATP synthase subunit beta OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=atpD PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.020e-44 Identity = 86/115 (74.78%), Postives = 97/115 (84.35%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD TEGLVRGQ+V +TG PITVPVG LGRIMNVIGEP+DE+G + T PIHR+AP F EQATE +ILVTGIKV+DL+APY +GGK+GLFGGAGVGKTVLI ELINNVAK H Sbjct: 59 MDSTEGLVRGQQVTSTGGPITVPVGPQVLGRIMNVIGEPVDERGPVVTAQRYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKGGKVGLFGGAGVGKTVLIQELINNVAKGH 173
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_HEMPU (ATP synthase subunit beta, mitochondrial OS=Hemicentrotus pulcherrimus PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.020e-44 Identity = 87/115 (75.65%), Postives = 100/115 (86.96%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MDGTEGL+RGQ+ ++TGSPI++PVG TLGRI+NVIGEPIDE+G + T+ IH EAP FVE + Q+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAH Sbjct: 108 MDGTEGLIRGQKCVDTGSPISIPVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAH 222 The following BLAST results are available for this feature:
BLAST of FC930380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930380 ID=FC930380; Name=FC930380; organism=Citrus clementina; type=EST; length=347bpback to top |