FC930380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_SYNJB (ATP synthase subunit beta OS=Synechococcus sp. GN=atpD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.476e-35 Identity = 68/115 (59.13%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M T+GLVRG V++TG+PITVPVG+ TLGRI NV+GEP+D+ ++ + + PIHR AP V+ + + TGIKV+DLLAP+++GGK+GLFGGAGVGKTVLI ELI+N+A+ H Sbjct: 70 MSSTDGLVRGMPVVDTGAPITVPVGQPTLGRIFNVLGEPVDQGEPVQAQEFAPIHRSAPPLVDLTIKPEPFETGIKVIDLLAPFKKGGKVGLFGGAGVGKTVLIQELIHNIAEEH 184
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_SYNFM (ATP synthase subunit beta OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=atpD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.476e-35 Identity = 67/115 (58.26%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD T+GLVRG V +TG+PI +PVG LGR++NV+G +D G + T+ Y+PIHR APAF EQ T ++L TG+KV+DLL P+ RGGK+G+FGGAGVGKTV++ME+I+N+A H Sbjct: 62 MDLTDGLVRGMPVKDTGNPIMMPVGAAVLGRVINVVGRTVDGLGPVNTDTYMPIHRTAPAFTEQDTSVKVLETGVKVIDLLVPFPRGGKMGMFGGAGVGKTVVMMEMIHNIAMQH 176
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_SHEAM (ATP synthase subunit beta OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=atpD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.476e-35 Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M ++GL RG V NTGS I VPVG+ TLGRIMNV+GEP+DE G + E IHR AP++ EQ+ ++L TGIKV+DL+ P+ +GGK+GLFGGAGVGKTV +MELINN+AKAH Sbjct: 59 MGSSDGLRRGIEVENTGSAIAVPVGKATLGRIMNVLGEPVDEAGPIGEEDRYVIHRAAPSYEEQSNTTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAH 173
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_COXBU (ATP synthase subunit beta OS=Coxiella burnetii GN=atpD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.476e-35 Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 58 MGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 172
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_COXBR (ATP synthase subunit beta OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=atpD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.476e-35 Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 58 MGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGTTELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 172
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_COXBN (ATP synthase subunit beta OS=Coxiella burnetii (strain Dugway 5J108-111) GN=atpD PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.476e-35 Identity = 73/115 (63.48%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M TEGL R V NT PI VPVG+ TLGRIMNV+GEPIDE G + ++ LPIHR AP+F+EQ+ ++L TGIKVVDLL P+ +GGK+GLFGGAGVGKTV +MELI N+A H Sbjct: 58 MGSTEGLKRDIAVKNTEKPIEVPVGKETLGRIMNVLGEPIDELGPINSKEKLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEH 172
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_VIBFM (ATP synthase subunit beta OS=Vibrio fischeri (strain MJ11) GN=atpD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.928e-35 Identity = 70/115 (60.87%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M ++GL RG V NTG+PI+VPVG TLGRIMNV+G+ IDE GD+ E + IHREAP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGKTV +MELINN+A H Sbjct: 57 MGSSDGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_VIBF1 (ATP synthase subunit beta OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=atpD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.928e-35 Identity = 70/115 (60.87%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M ++GL RG V NTG+PI+VPVG TLGRIMNV+G+ IDE GD+ E + IHREAP++ EQ+ ++L TG+KV+DL+ P+ +GGKIGLFGGAGVGKTV +MELINN+A H Sbjct: 57 MGSSDGLRRGLTVENTGAPISVPVGTKTLGRIMNVLGDAIDECGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPFAKGGKIGLFGGAGVGKTVNMMELINNIALQH 171
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_CHLL2 (ATP synthase subunit beta OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=atpD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.928e-35 Identity = 72/113 (63.72%), Postives = 87/113 (76.99%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAK 339 M+ T+GLVRG V+NTG I VPVG LGR++NV+GEPID KG + T+ IHR AP F + +T+ ++ TGIKV+DLL PY RGGK GLFGGAGVGKTVLIMELINN+AK Sbjct: 58 MESTDGLVRGLSVVNTGKSIQVPVGSEVLGRMLNVVGEPIDGKGAVNTKKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAK 170
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_BACWK (ATP synthase subunit beta OS=Bacillus weihenstephanensis (strain KBAB4) GN=atpD PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.928e-35 Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTE-HYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M T+GLVRG V +TG I+VPVG VTLGR+ NV+G+ ID GD+ + PIHR+APAF E +T+ +IL TGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINN+A+ H Sbjct: 62 MSSTDGLVRGTEVEDTGKAISVPVGDVTLGRVFNVLGDAIDLDGDVPADVRRDPIHRQAPAFEELSTKVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEH 177 The following BLAST results are available for this feature:
BLAST of FC930380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930380 ID=FC930380; Name=FC930380; organism=Citrus clementina; type=EST; length=347bpback to top |