FC930380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_CARHZ (ATP synthase subunit beta OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.055e-41 Identity = 77/115 (66.96%), Postives = 97/115 (84.35%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M T+GLVRG +V++TG+PITVPVGR LGR++NV+GEPID KG ++++HY PIHR AP EQ+T +IL TGIKV+DLL P+ +GGKIGLFGGAGVGKTV++MELINN+AK H Sbjct: 65 MSSTDGLVRGMKVVDTGAPITVPVGRPVLGRLLNVLGEPIDGKGPVESDHYYPIHRPAPPLEEQSTRAEILETGIKVIDLLVPFLKGGKIGLFGGAGVGKTVIVMELINNIAKQH 179
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.055e-41 Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD TEGLVRGQ V +TG PI VPVG TLGRIMNVIGE +DE G + E IH++AP++ EQ+TE ++LVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 58 MDSTEGLVRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAH 172
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_SCEOB (ATP synthase subunit beta, chloroplastic OS=Scenedesmus obliquus GN=atpB PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.378e-41 Identity = 82/115 (71.30%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 M+ T+GL+RG VL+TG P+ VPVG+ TLGRI NV+GEP+D G +K E LPIHR APAFV+ T I TGIKVVDLLAPY+RGGKIGLFGGAGVGKTVLIMELINN+AKAH Sbjct: 68 MNPTDGLMRGMEVLDTGKPLNVPVGKSTLGRIFNVLGEPVDNLGPVKNEESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAH 182
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_JANSC (ATP synthase subunit beta OS=Jannaschia sp. (strain CCS1) GN=atpD PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.378e-41 Identity = 81/115 (70.43%), Postives = 95/115 (82.61%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD +EGLVRGQ V +T PITVPVG TLGRI+NV+GEP+DE G + E IH++AP F +Q+TE ++LVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 58 MDSSEGLVRGQEVTDTDGPITVPVGPGTLGRILNVVGEPVDEGGPVDAEERRGIHQDAPEFADQSTEAEVLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVH 172
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_ACICJ (ATP synthase subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=atpD PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.378e-41 Identity = 83/115 (72.17%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD T+GL RG V +TG I VPVG TLGRI+NVIGEPIDE+G + T PIHR+AP+F EQAT +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 59 MDSTDGLARGDEVRDTGEAIAVPVGPETLGRILNVIGEPIDERGPIPTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGH 173
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_SPHWW (ATP synthase subunit beta OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.800e-41 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD T+GL RGQ V +TGS I VPVG TLGRI+NVIGEPIDE+G + PIH EAP FV+Q+T+ ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AK H Sbjct: 63 MDATDGLTRGQEVTDTGSQIRVPVGPQTLGRILNVIGEPIDERGPVNATQTSPIHAEAPLFVDQSTDASILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGH 177
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_SILPO (ATP synthase subunit beta OS=Silicibacter pomeroyi GN=atpD PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.800e-41 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD TEGLVRG V +TG PI+VPVG TLGRI+NVIGEP+DEKG + IH+ AP+F EQ+T ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 58 MDATEGLVRGAVVTDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATETRAIHQPAPSFDEQSTSSDILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVH 172
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_RHOS5 (ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD TEGLVRG V + G PI+VPVG TLGRI+NVIGEPIDEKG + + IH+ AP F EQ+T +ILVTGIKV+DLLAPY +GGKIGLFGGAGVGKTVLIMELINN+AK H Sbjct: 59 MDATEGLVRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVH 173
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB_GRABC (ATP synthase subunit beta OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=atpD PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41 Identity = 84/115 (73.04%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD T+GLVRG V + G PITVPVG TLGRI+NVIGEPIDE+G + + IHREAP+F EQA +ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLI ELINN+AKAH Sbjct: 59 MDSTDGLVRGAEVEDLGRPITVPVGPGTLGRILNVIGEPIDERGPVDAKKTYSIHREAPSFEEQAASAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKAH 173
BLAST of FC930380 vs. ExPASy Swiss-Prot
Match: ATPB3_PELCD (ATP synthase subunit beta 3 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=atpD3 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41 Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 1 MDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVIGEPIDEKGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAH 345 MD T+GLVRGQ VLNTG I+VPVGR TLGRI+NVIGEP+DE+G ++T+ IHR P FV+Q+T+ + TGIKVVDLLAPY RGGKIGLFGGAGVGKTVLIMELI+N+AK H Sbjct: 62 MDSTDGLVRGQEVLNTGRQISVPVGRGTLGRILNVIGEPVDEQGPVETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELIHNIAKKH 176 The following BLAST results are available for this feature:
BLAST of FC930380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930380 ID=FC930380; Name=FC930380; organism=Citrus clementina; type=EST; length=347bpback to top |