FC930381

Overview
NameFC930381
Unique NameFC930381
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6173 contig Ccv1_Contig6173:29..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.824e-62
Identity = 123/209 (58.85%), Postives = 156/209 (74.64%), Query Frame = 2
Query:   92 ADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGP--NEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDH 712
            A EL + A  +   GKGILAADEST TI KR  +I +EN   NR + R+LLF T G  +++SG ILFEETL+QK  AG P V++L + G++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWRAVL I P   +P+ L+I E + GLARYA ICQ+N LVPIVEPEIL DG H I  CA VT++VLA+ +KAL+D+
Sbjct:    8 AQELAETAKKLVAAGKGILAADESTQTIKKRFDNIKIENTVQNRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPLVNLLHDEGIIPGIKVDKGLVSIPCTDDEKSTQGLDGLAERCKEYYKAGARFAKWRAVLVIDPAKGKPTDLSIQEVSWGLARYASICQQNKLVPIVEPEILADGAHTIEVCATVTQKVLASVFKALHDN 216          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.817e-62
Identity = 123/206 (59.71%), Postives = 149/206 (72.33%), Query Frame = 2
Query:   98 ELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQY-LSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDH 712
            EL + A  I +PGKGILAADES G++GKRL+ I VEN E NRR  R++LF     +   + GVI F ETLYQ +  G PFV ++K+ G+  GIKVDKG V L GTNGET TQGLDGL++RC +Y + GA FAKWR V+KI    PS L I ENA  LARYA ICQ++G+VPIVEPEIL DG H++ +C  VTERVLAA YKA+ DH
Sbjct:   15 ELHEIALRIVSPGKGILAADESIGSMGKRLNQIGVENNEENRRLFRQVLFTADDRIDNCIGGVIFFHETLYQNSDDGVPFVKMIKDKGITIGIKVDKGVVPLPGTNGETATQGLDGLSERCAQYKKDGADFAKWRCVMKISETTPSNLCITENAKVLARYASICQQHGIVPIVEPEILPDGDHNLKRCQFVTERVLAAVYKAMFDH 220          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.291e-62
Identity = 124/210 (59.05%), Postives = 150/210 (71.43%), Query Frame = 2
Query:   83 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDH 712
            G YADEL+K A  I +PG+GILA DES  T GKRL+SI +EN E NR+A R LL   P   +Y+SG ILFEETLYQ T  G+  VDVL E  ++PGIKVDKG V LAG+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGLVPIVEPEIL+DG H I++  +V ++V A  +  L ++
Sbjct:    7 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAEN 215          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.390e-61
Identity = 123/202 (60.89%), Postives = 145/202 (71.78%), Query Frame = 2
Query:   89 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACY 694
            YADEL+K A  I +PG GI+A DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E  ++PGIKVDKG V L G+  E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q++GLVPIVEPEI++DG H I++  DV E+V A  +
Sbjct:   52 YADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVF 252          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.122e-61
Identity = 120/199 (60.30%), Postives = 146/199 (73.37%), Query Frame = 2
Query:   83 GKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERV 679
            G Y+DEL+K A  I +PG+GILA DES  T GKRL+SI ++N E NR+A R+LL  TPG   Y+SG ILFEETLYQ T  GK FVD L++  ++PGIKVDKG   LAG+N E+  QGLDGLA R  +YY+ GARFAKWR V+ + P  PS LA+ E A GLARYA I Q+NGLVPIVEPEIL+DG H I +  +V E+V
Sbjct:   42 GAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSV-PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKV 239          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 232.261 bits (591), Expect = 2.024e-60
Identity = 121/202 (59.90%), Postives = 146/202 (72.28%), Query Frame = 2
Query:   89 YADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACY 694
            YADEL+K A  + +PG+GILA DES  T GKRL+SI +EN EANR+A R LL   PG  QY+SG ILFEETLYQ T  GK  VDVL E G++PGIKVDKG + L G+N E+  QGLDGLA R   YY+ GARFAKWR V+ I PN PS LA+ E A GLARYA I Q+NGL PI+EPEI++DG H I++   V ++V A  +
Sbjct:   49 YADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVF 249          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.508e-60
Identity = 120/209 (57.42%), Postives = 152/209 (72.73%), Query Frame = 2
Query:   92 ADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKI--GPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDH 712
            A+EL   A  +   GKGILAADEST TI KR  +I +EN   NR + R+LLF T G  +++SG ILFEETL+QK  AG P V++L    ++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWR VL I     +P+ L+I+E A GLARYA ICQ+N LVPIVEPEIL DGPH I  CA VT++VL+  +KAL ++
Sbjct:   19 AEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQEN 227          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.508e-60
Identity = 120/209 (57.42%), Postives = 152/209 (72.73%), Query Frame = 2
Query:   92 ADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKI--GPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDH 712
            A+EL   A  +   GKGILAADEST TI KR  +I +EN   NR + R+LLF T G  +++SG ILFEETL+QK  AG P V++L    ++PGIKVDKG V +  T+ E +TQGLDGLA+RC++YY+AGARFAKWR VL I     +P+ L+I+E A GLARYA ICQ+N LVPIVEPEIL DGPH I  CA VT++VL+  +KAL ++
Sbjct:   19 AEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQEN 227          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.312e-59
Identity = 124/208 (59.62%), Postives = 149/208 (71.63%), Query Frame = 2
Query:   95 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGAL-QYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGL-ARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDH 712
            DEL   A  I TPGKGILAADESTG++ KRL+SI +EN E NRR  R+LLF     L +Y+SGVI+F ET YQKT  GKPF  +L+E G++PGIKVDKG V +AGT GE TTQGLD L  RC +Y + GA+FAKWR V KI    PS  A+ E A+ L +RYA ICQ+NGLVPIVEPEIL DG H + +   +TE VL+  Y ALN+H
Sbjct:   14 DELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEH 221          
BLAST of FC930381 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.713e-59
Identity = 111/203 (54.68%), Postives = 142/203 (69.95%), Query Frame = 2
Query:   95 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKAL 703
            ++L + A  +  PGKGI+A DEST TI KR +S+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G PF + +   G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  N++ LARYA +CQE GLVP+VEPE+++DG HDI  C +VTE  L + + AL
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGAL 206          
The following BLAST results are available for this feature:
BLAST of FC930381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF2_PLABA2.824e-6258.85Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDCA_DANRE4.817e-6259.71Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALFC1_PEA6.291e-6259.05Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC1_ARATH2.390e-6160.89Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC3_ARATH3.122e-6160.30Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_SPIOL2.024e-6059.90Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF_PLAFA4.508e-6057.42Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF74.508e-6057.42Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF1_CAEEL1.312e-5959.62Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF1_XANAC1.713e-5954.68Probable fructose-bisphosphate aldolase class 1 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34006H11EF PostHarvC1 Citrus clementina cDNA clone C34006H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930381 ID=FC930381; Name=FC930381; organism=Citrus clementina; type=EST; length=712bp
GGCATAAAATCGCTCTCTCTGTTTCTCCCTCTAACAAAACAAATTTTCTA
TCTTCAAGTAGATCACCATGTCTTGCTTCAAGGGCAAATACGCCGATGAG
CTCATTAAAAACGCTGCCTACATTGGCACCCCTGGAAAGGGTATCCTTGC
TGCTGATGAGTCAACAGGCACCATTGGCAAGCGTCTATCCAGCATCAATG
TTGAGAATGTTGAGGCAAACAGGCGTGCTCTCCGCGAGCTCCTTTTCTGC
ACTCCCGGTGCCCTTCAGTACCTCAGTGGTGTCATCCTCTTCGAGGAGAC
CCTCTACCAGAAGACTGCTGCTGGCAAGCCCTTTGTTGATGTCTTGAAGG
AGGGTGGAGTCCTCCCTGGAATTAAGGTTGACAAGGGTACTGTTGAGCTT
GCTGGTACCAATGGTGAGACCACCACCCAGGGTCTTGATGGCCTCGCCCA
GCGCTGCCAGAAATACTATGAAGCTGGTGCTCGTTTTGCCAAATGGCGTG
CTGTTCTTAAGATTGGCCCTAATGAGCCTTCGCAGCTGGCCATCAATGAG
AATGCCAATGGCCTGGCCCGATATGCTATCATCTGCCAGGAGAATGGCCT
TGTTCCCATTGTTGAACCTGAGATCCTTGTTGACGGTCCCCATGACATCA
ACAAGTGTGCTGATGTGACCGAGCGTGTTCTTGCTGCATGCTACAAGGCT
CTGAATGACCAC
back to top