FC930382

Overview
NameFC930382
Unique NameFC930382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length307
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig794 contig Ccv1_Contig794:10..316. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.288e-49
Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI+INLDL RGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.020e-49
Identity = 94/102 (92.16%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPD+EIL+IVKENFDFRPGM++INLDLKRGGN RFLKTAAYGHFGR+D D
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDAD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.020e-49
Identity = 92/102 (90.20%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTY+TGKIPDK+IL ++KENFDFRPGMIAINLDLKRGGN RF KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILDLIKENFDFRPGMIAINLDLKRGGNFRFQKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.178e-48
Identity = 94/102 (92.16%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKENFDFRPGMIAINLDLKRGGN RFLKTAAYGHFGR+D D
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGMIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDTD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.178e-48
Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE+FDFRPGMIAI+LDLKRGGN RFLKTAAYGHFGR+D D
Sbjct:  243 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAIHLDLKRGGNGRFLKTAAYGHFGRDDAD 344
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.539e-48
Identity = 91/102 (89.22%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVDTY+TGKIPD++IL ++KENFDFRPGMIAINLDL RGGNSR+ KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDRDILELIKENFDFRPGMIAINLDLMRGGNSRYQKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.539e-48
Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAY+ RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TG+IPDKEIL+IVKENFDFRPGMI INLDLK+GGN R+LKTAAYGHFGR+DPD
Sbjct:  279 TKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPD 380
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 1.539e-48
Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAY+ RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TG+IPDKEIL+IVKENFDFRPGMI INLDLK+GGN R+LKTAAYGHFGR+DPD
Sbjct:  279 TKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPD 380
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 2.624e-48
Identity = 91/102 (89.22%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVDTY+TGKIPDK+IL ++K+NFDFRPGMI+INLDLKRGGN RF KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKKNFDFRPGMISINLDLKRGGNFRFQKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.427e-48
Identity = 94/102 (92.16%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPGMI INLDLKRGGN RF+KTAAYGHFGR+DPD
Sbjct:  279 TKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGN-RFIKTAAYGHFGRDDPD 379
The following BLAST results are available for this feature:
BLAST of FC930382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SOLLC5.288e-4993.14S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK_SOLBR9.020e-4992.16S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK3_VITVI9.020e-4990.20S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK3_PETHY1.178e-4892.16S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK3_ACTCH1.178e-4893.14S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK4_POPTR1.539e-4889.22S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK1_ORYSJ1.539e-4890.20S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI1.539e-4890.20S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_VITVI2.624e-4889.22S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK_DENCR3.427e-4892.16S-adenosylmethionine synthetase OS=Dendrobium crum... [more]

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Properties
Property NameValue
Genbank descriptionC34007A01EF PostHarvC1 Citrus clementina cDNA clone C34007A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930382 ID=FC930382; Name=FC930382; organism=Citrus clementina; type=EST; length=307bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACT
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