FC930382

Overview
NameFC930382
Unique NameFC930382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length307
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.427e-48
Identity = 94/102 (92.16%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL IVKE+FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGR+D D
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDAD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.427e-48
Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFLKTAAYGHFGRDDPD 376
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 4.476e-48
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDTY TGKIPDK+IL+IVKENFDFRPGMI+INLDLKRGGN+RF KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 4.476e-48
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TG+IPDKEIL IVKENFDFRPGMI INLDLKRGGN RFLKTA YGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 5.846e-48
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPD+EILRIV ENFDFRPGMI INLDL RGGN R+LKTAAYGHFGREDPD
Sbjct:  279 TKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFDFRPGMIIINLDLMRGGNGRYLKTAAYGHFGREDPD 380
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.636e-48
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL IVKE FDFRPGMI+INLDLKRGGN+RFLKTAAYGHFGR+D D
Sbjct:  278 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILNIVKETFDFRPGMISINLDLKRGGNNRFLKTAAYGHFGRDDAD 379
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 9.972e-48
Identity = 94/102 (92.16%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL+IVKENFDFRPGM+ INLDLKRGGN RF+KTAAYGHFGREDPD
Sbjct:  278 TKVDRSGAYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFIKTAAYGHFGREDPD 378
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 9.972e-48
Identity = 90/102 (88.24%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAY+VRQAAKS+VASGLARRCIVQVSYAIGVPEPLSVFVDTY+TGKIPDK+IL ++KENFDFRPGMIAINLDLKRGGN R+ KTAAYGHFGR+D D
Sbjct:  276 TKVDRSGAYVVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDAD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.701e-47
Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVP+PLSVFVD+Y TG IPDKEIL+IVKE FDFRPGMIAINLDLKRGGN+RFLKTAAYGHFGR+D D
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGNIPDKEILKIVKETFDFRPGMIAINLDLKRGGNNRFLKTAAYGHFGRDDAD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.222e-47
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TG IPDKEIL ++KENFDFRPGMI INLDLKRGGN RF KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILELIKENFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPD 377
The following BLAST results are available for this feature:
BLAST of FC930382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_BRAJU3.427e-4892.16S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK1_POPTR3.427e-4893.14S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK2_SUASA4.476e-4891.18S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK1_ELAUM4.476e-4890.20S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK3_ORYSJ5.846e-4891.18S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK_MEDFA7.636e-4891.18S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK2_ORYSJ9.972e-4892.16S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK2_ACTCH9.972e-4888.24S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK2_DAUCA1.701e-4790.20S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK2_PICSI2.222e-4788.24S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]

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Properties
Property NameValue
Genbank descriptionC34007A01EF PostHarvC1 Citrus clementina cDNA clone C34007A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930382 ID=FC930382; Name=FC930382; organism=Citrus clementina; type=EST; length=307bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACT
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