FC930382

Overview
NameFC930382
Unique NameFC930382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length307
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig794 contig Ccv1_Contig794:10..316. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.902e-47
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGM++INLDLKRGGN RF KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMMSINLDLKRGGNGRFQKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.949e-47
Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARR IVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL IVKE+FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGR+D D
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDAD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 8.442e-47
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYETGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.103e-46
Identity = 91/102 (89.22%), Postives = 94/102 (92.16%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAY+ RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI INLDLKRGG  R+LKTAAYGHFGRE  D
Sbjct:  279 TKVDRSGAYVARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGKGRYLKTAAYGHFGREGAD 380
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.103e-46
Identity = 91/102 (89.22%), Postives = 98/102 (96.08%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVD+Y TGKIPDKEIL+IVKENFDFRPGMI+INLDLK+GGN RF+KTAAYGHFGRED D
Sbjct:  278 TKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKKGGN-RFIKTAAYGHFGREDAD 378
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.103e-46
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VASGLARRC+VQVSYAIGV EPLSVFVDTY+TGKI DK+IL ++KENFDFRPGMIAINLDLKRGGN R+ KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.440e-46
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLS+FVDTY TG IPDKEIL I+KE+FDFRPGMI+INLDLKRGGN R  KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSIPDKEILEIIKEHFDFRPGMISINLDLKRGGNGRSQKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.440e-46
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.440e-46
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VA+G+ARR +VQVSYAIGVPEPLSVFVDTY TG IPDKEIL+IVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.440e-46
Identity = 91/102 (89.22%), Postives = 95/102 (93.14%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSIVASG+ARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL IVKENFDFRPGMI INLDLKRGG+ R+LKTAAYGHFGR+  D
Sbjct:  279 TKVDRSGAYIARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGSGRYLKTAAYGHFGRDGAD 380
The following BLAST results are available for this feature:
BLAST of FC930382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_BETVU2.902e-4790.20S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK4_ARATH4.949e-4791.18S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK1_ARATH8.442e-4787.25S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_WHEAT1.103e-4689.22S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK1_TRIMO1.103e-4689.22S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK1_ACTCH1.103e-4687.25S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK_PINBN1.440e-4688.24S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_BRARP1.440e-4687.25S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU1.440e-4687.25S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK4_HORVU1.440e-4689.22S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionC34007A01EF PostHarvC1 Citrus clementina cDNA clone C34007A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930382 ID=FC930382; Name=FC930382; organism=Citrus clementina; type=EST; length=307bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACT
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