FC930382

Overview
NameFC930382
Unique NameFC930382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length307
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig794 contig Ccv1_Contig794:10..316. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.632e-45
Identity = 87/102 (85.29%), Postives = 97/102 (95.10%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSI+ASGLARRCIVQ+SYAIGVPEPLSVFVD+Y TGKIPD+EIL++VKENFDFRPGMI+INLDLK+GG  RF+KTAAYGHFGR+D D
Sbjct:  278 TKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGG-KRFIKTAAYGHFGRDDAD 378          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.632e-45
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGMIAINLDL +GG SR+LKTAAYGHFGR+D D
Sbjct:  280 TKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGG-SRYLKTAAYGHFGRDDAD 380          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 4.632e-45
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGMIAINLDL +GG SR+LKTAAYGHFGR+D D
Sbjct:  280 TKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKETFDFRPGMIAINLDLLKGG-SRYLKTAAYGHFGRDDAD 380          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.050e-45
Identity = 90/102 (88.24%), Postives = 95/102 (93.14%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAY+ RQAAKSIVAS LARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPG+I INL LKRGG  R+LKTAAYGHFGR+DPD
Sbjct:  277 TKVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGG-YRYLKTAAYGHFGRDDPD 377          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.032e-44
Identity = 85/102 (83.33%), Postives = 95/102 (93.14%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VASGLARRCIVQVSYAIGV EPLSVFVDTY+TG IP K++L ++KENFDFRPGM++INLDL RGGN R+ KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPD 377          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.348e-44
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGV EPLSVFVDTY+TG IPDK+IL ++KENFDFRPGMIAINLDL RGGN R+ KTAAYGHFGR++ D
Sbjct:  276 TKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEAD 377          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.922e-44
Identity = 86/102 (84.31%), Postives = 93/102 (91.18%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGV   LS+FVD+Y TG IPDKEIL I+KE+FDFRPGMI INLDLKRGGN RF KTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVRGALSIFVDSYGTGSIPDKEILEIIKEHFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPD 377          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.262e-42
Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKSIVA+GLARRCIVQ+SYAIGV EPLSVFVDTY TGKI DK+IL+IVKE FDFRPGMIA NLDL RGGN R+LKTAAYGHFGR+D D
Sbjct:  276 TKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVAEPLSVFVDTYGTGKISDKDILKIVKETFDFRPGMIANNLDLLRGGN-RYLKTAAYGHFGRDDAD 376          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.822e-41
Identity = 78/102 (76.47%), Postives = 92/102 (90.20%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQAAKS+VASGLA+RC+VQVSY+I V EPLSVFVDTY TG +PD EIL++++++FDFRPG+I  NLDLKRGGN R+ KTAAYGHFGR+DPD
Sbjct:  279 TKVDRSGAYIARQAAKSVVASGLAKRCLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPD 380          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.722e-37
Identity = 76/100 (76.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRED 300
            TKVDRSGAYI RQAAKS+VA+GLARRC+ Q+SYAIGV EPLSV VDTY TGKIPD EIL  VK  FDFRPGM+   LDLKRGGN R+  TAAYGHFGR++
Sbjct:  275 TKVDRSGAYISRQAAKSVVAAGLARRCLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDE 374          
The following BLAST results are available for this feature:
BLAST of FC930382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_HORVU4.632e-4585.29S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK2_ATRNU4.632e-4588.24S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU4.632e-4588.24S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK_MUSAC6.050e-4588.24S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_PETHY1.032e-4483.33S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK2_TOBAC1.348e-4484.31S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_PINCO3.922e-4484.31S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK_MESCR1.262e-4285.29S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK_CHLRE1.822e-4176.47S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU2.722e-3776.00S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionC34007A01EF PostHarvC1 Citrus clementina cDNA clone C34007A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930382 ID=FC930382; Name=FC930382; organism=Citrus clementina; type=EST; length=307bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACT
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