FC930382

Overview
NameFC930382
Unique NameFC930382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length307
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig794 contig Ccv1_Contig794:10..316. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.643e-37
Identity = 75/102 (73.53%), Postives = 84/102 (82.35%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYI RQ AKSIVA+GLARR + Q+SYAIGV +PLS+ VDTY +GKIPD EIL  VKE FDFR GMI  +LDLKRGGN R+  TAAYGHFGR+D D
Sbjct:  275 TKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDDTD 376          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.064e-37
Identity = 76/96 (79.17%), Postives = 85/96 (88.54%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHF 288
            TKVDRSGAYIVR+AAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TGKIPD+EIL IVKE FDFRPGMI+I+LDL RGGN RF + +    F
Sbjct:  278 TKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDREILNIVKEAFDFRPGMISISLDLLRGGNGRFFEDSCIWTF 373          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.354e-28
Identity = 66/102 (64.71%), Postives = 75/102 (73.53%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAY  R  AKS+VA+GLA RC+VQVSY+IGV +PLSVFVDTY TGK  D EIL I+  NFD RPG +  +L L R     F KTA+ GHFGR DPD
Sbjct:  275 TKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRNDPD 373          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.689e-27
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRS +Y++R  AK+IVA+GLA RC +QV+YAIGV  PLS+ V+T+ TGKI D +I+ ++K+NFD RP  I  +LDL+R     + KTAAYGHFGRED +
Sbjct:  280 TKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNFDLRPAAIIRDLDLRR---PIYRKTAAYGHFGREDAE 378          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_SYMTH (S-adenosylmethionine synthetase OS=Symbiobacterium thermophilum GN=metK PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.704e-27
Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAY  R  AK+IVA+GLAR+C VQV+YAIGV  P+S+ V T+ TGK+PD+ + ++V+E FD RPG I  +LDL+R     + + AAYGHFGR D D
Sbjct:  282 TKVDRSGAYAARWVAKNIVAAGLARKCEVQVAYAIGVAHPVSILVTTFGTGKLPDERLAQLVRETFDLRPGAIIRDLDLRR---PIYRQVAAYGHFGRPDLD 380          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.215e-26
Identity = 61/102 (59.80%), Postives = 73/102 (71.57%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRS  Y  R  AK+IVA+GLA++C VQ+SYAIGV  PLS+ VDT+ TGKI D++I  IVK  FD RP  I  +LDL+R     + K AAYGHFGRED D
Sbjct:  279 TKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGREDLD 377          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_COXBU (S-adenosylmethionine synthetase OS=Coxiella burnetii GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.073e-25
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            +KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+
Sbjct:  270 SKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPE 368          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_COXBR (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.073e-25
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            +KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+
Sbjct:  270 SKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPE 368          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_COXB2 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuG_Q212) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.073e-25
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            +KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+
Sbjct:  270 SKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPE 368          
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_COXB1 (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain CbuK_Q154) GN=metK PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.073e-25
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 1
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            +KVDRSGAY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+T+ TGKI +  I +++KE+FD RPG I   L+L R   S +  TA YGHFGRE+P+
Sbjct:  270 SKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRIQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPE 368          
The following BLAST results are available for this feature:
BLAST of FC930382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA4.643e-3773.53S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PEA6.064e-3779.17S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK_DICDI1.354e-2864.71S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_SYNWW5.689e-2757.84S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_SYMTH9.704e-2757.84S-adenosylmethionine synthetase OS=Symbiobacterium... [more]
METK_CALS88.215e-2659.80S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_COXBU1.073e-2557.84S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXBR1.073e-2557.84S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB21.073e-2557.84S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_COXB11.073e-2557.84S-adenosylmethionine synthetase OS=Coxiella burnet... [more]

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Properties
Property NameValue
Genbank descriptionC34007A01EF PostHarvC1 Citrus clementina cDNA clone C34007A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930382 ID=FC930382; Name=FC930382; organism=Citrus clementina; type=EST; length=307bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACT
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